RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SYTL3Q4VX76 610 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 ULK2Q8IYT8 1036 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 SLC35B2Q8TB61 432 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
SCAF1-201ENST00000360565 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 MFSD11O43934 449 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 RPLP2P05387 115 aaKnown RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 C2P06681 752 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 COX4I1P13073 169 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 DARSP14868 501 aaKnown RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 IL1R2P27930 398 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 RHOAP61586 193 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 TBCELQ5QJ74 424 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 ANKS6Q68DC2 871 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 USP50Q70EL3 339 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 FAM35AQ86V20 835 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CARNMT1Q8N4J0 409 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 TAS2R13Q9NYV9 303 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CHKBQ9Y259 395 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 PGK1P00558 417 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CHRNB3Q05901 458 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 ATP6AP1LQ52LC2 224 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 NET1Q7Z628 596 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 PCDH19Q8TAB3 1148 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 C12orf42Q96LP6 360 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 ZFP42Q96MM3 310 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF317Q96PQ6 595 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 FZD8Q9H461 694 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 ALG9Q9H6U8 611 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CNGB3Q9NQW8 809 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 DAB1O75553 588 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-201ENST00000360565 CCDC15Q0P6D6 951 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 GTF2H3Q13889 308 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 NDNQ99608 321 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 XPR1Q9UBH6 696 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 HMGXB4Q9UGU5 601 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 FBXO5Q9UKT4 447 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 FAM50BQ9Y247 325 aa16.6■□□□□ 0.25
SCAF1-201ENST00000360565 TSPAN1O60635 241 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 ASPAP45381 313 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PYROXD2Q8N2H3 581 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 ATP13A1Q9HD20 1204 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 MARCH2Q9P0N8 246 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 EIF3LQ9Y262 564 aaKnown RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 INPP4BO15327 924 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 CYP2C18P33260 490 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.258e-7■■■■■ 33.8
SCAF1-201ENST00000360565 MYLPFQ96A32 169 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 TMEM79Q9BSE2 394 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 ADGRE3Q9BY15 652 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 ST3GAL5Q9UNP4 418 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 RPL26L1Q9UNX3 145 aaKnown RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 CDH2P19022 906 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 CD86P42081 329 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 GPD2P43304 727 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 DHFR2Q86XF0 187 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 KCTD15Q96SI1 283 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 SEPHS2Q99611 448 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PCDHB8Q9UN66 801 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 NDUFAF1Q9Y375 327 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 H7C4K7 107 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PSMD12O00232 456 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 MDM4O15151 490 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 RASSF9O75901 435 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 PIGRP01833 764 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 TPSB2P20231 275 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 MAXP61244 160 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 TPSAB1Q15661 275 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 LGI2Q8N0V4 545 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 GSTCDQ8NEC7 633 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 FOPNLQ96NB1 174 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 SLC25A23Q9BV35 468 aa16.59■□□□□ 0.25
SCAF1-201ENST00000360565 DENND2DQ9H6A0 471 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-201ENST00000360565 FAM58BPP0C7Q3 252 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ANPEPP15144 967 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ITGB6P18564 788 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 TSPAN8P19075 237 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ATP6V1C1P21283 382 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ATP5F1P24539 256 aaPredicted RBP16.58■□□□□ 0.25
SCAF1-201ENST00000360565 CRHR1P34998 444 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ATXN1P54253 815 aaKnown RBP16.58■□□□□ 0.25
SCAF1-201ENST00000360565 PPM1JQ5JR12 505 aa16.58■□□□□ 0.25
SCAF1-201ENST00000360565 ZFP1Q6P2D0 407 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms