RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PLD1Q13393 1074 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 EIF4EBP2Q13542 120 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 BMPR2Q13873 1038 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PPP2R5DQ14738 602 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PDK1Q15118 436 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 USP41Q3LFD5 358 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TUBB8Q3ZCM7 444 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SPDYCQ5MJ68 293 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CNKSR3Q6P9H4 555 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PPP1R21Q6ZMI0 780 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 C16orf59Q7L2K0 433 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PCGF5Q86SE9 256 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MON1AQ86VX9 555 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF354CQ86Y25 554 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 LRRC49Q8IUZ0 686 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PNPLA1Q8N8W4 532 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 OR52K1Q8NGK4 314 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ATP2A3Q93084 1043 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 IGSF8Q969P0 613 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TOP1MTQ969P6 601 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SPDL1Q96EA4 605 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PGAP3Q96FM1 320 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 C8orf48Q96LL4 319 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF512Q96ME7 567 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 KLHL5Q96PQ7 755 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 CYP2S1Q96SQ9 504 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SLC9A7Q96T83 725 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PAFAH2Q99487 392 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PRKD2Q9BZL6 878 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 FAM129AQ9BZQ8 928 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ATXN3LQ9H3M9 355 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ALG13Q9NP73 1137 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SMYD2Q9NRG4 433 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 SMPD4Q9NXE4 827 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ARHGEF38Q9NXL2 777 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 MARCH2Q9P0N8 246 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
ATXN3-202ENST00000359366 TEX264Q9Y6I9 313 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 PTPRSQ13332 1948 aa5.2□□□□□ -1.58
ATXN3-202ENST00000359366 LCHNA4D1U4 455 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 EME2A4GXA9 379 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 GRXCR2A6NFK2 248 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 KCNU1A8MYU2 1149 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 E7ESA3 106 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 J3KR12 359 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CHADO15335 359 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TLR5O60602 858 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TOP3BO95985 862 aaKnown RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 AGTP01019 485 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 HSPA8P11142 646 aaKnown RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 NFKB1P19838 968 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 ETFBP38117 255 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 RANBP1P43487 201 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MMP13P45452 471 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 PGGT1BP53609 377 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MAXP61244 160 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 DYNC1I2Q13409 638 aaKnown RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 XRCC4Q13426 336 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 E2F5Q15329 346 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CLPPQ16740 277 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MS4A13Q5J8X5 152 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 NUGGCQ68CJ6 796 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 UNC5AQ6ZN44 842 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 ANKS3Q6ZW76 656 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 ARHGAP12Q8IWW6 846 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 DNAJC5GQ8N7S2 189 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CNTD1Q8N815 330 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 PPM1NQ8N819 430 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MAML1Q92585 1016 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TMEM169Q96HH4 297 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 OXNAD1Q96HP4 312 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 FUBP3Q96I24 572 aaKnown RBP eCLIP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MRPL9Q9BYD2 267 aaKnown RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 BRD8Q9H0E9 1235 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 FBXO44Q9H4M3 255 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 PNPLA8Q9NP80 782 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 SYBUQ9NX95 663 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 PLXNA3P51805 1871 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 WDR91A4D1P6 747 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF487B1APH4 448 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 EBAG9O00559 213 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 NDUFAB1O14561 156 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 HGSO14964 777 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 HOXA2O43364 376 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 ATP9BO43861 1147 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TSPAN3O60637 253 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CDH16O75309 829 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 TIMP1P01033 207 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CSH1P0DML2 217 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 CSH2P0DML3 217 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 IDO1P14902 403 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 FOSL1P15407 271 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 GJA1P17302 382 aa5.19□□□□□ -1.58
ATXN3-202ENST00000359366 PAPOLAP51003 745 aaKnown RBP5.19□□□□□ -1.58
ATXN3-202ENST00000359366 SGSHP51688 502 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms