RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZNF783Q6ZMS7 281 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 C3orf62Q6ZUJ4 267 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 SETD3Q86TU7 594 aaPredicted RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 CAND1Q86VP6 1230 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 HLA-CQ95604 372 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 TLCD1Q96CP7 247 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 CELF6Q96J87 481 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 PWWP2AQ96N64 755 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 FCRL5Q96RD9 977 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 LRRC40Q9H9A6 602 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 RSPH14Q9UHP6 348 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 LGALS13Q9UHV8 139 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
CCDC197-201ENST00000359253 ADAM21Q9UKJ8 722 aa13.79□□□□□ -0.2
CCDC197-201ENST00000359253 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 TYW5A2RUC4 315 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 RASA4BC9J798 803 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 KCNK1O00180 336 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ZBTB24O43167 697 aaPredicted RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 RASA4O43374 803 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 CLASP2O75122 1294 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 NEBLO76041 1014 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 JCHAINP01591 159 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 HDCP19113 662 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 PSMB4P28070 264 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 GABRR2P28476 465 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 OR1E1P30953 314 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 CORO1AP31146 461 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 STX2P32856 288 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 NRIP1P48552 1158 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 NPY2RP49146 381 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 KCNQ1P51787 676 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 CLCN4P51793 760 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 EPHA5P54756 1037 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 GEMP55040 296 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 SKOR1P84550 965 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 PUS10Q3MIT2 529 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 FAM133BQ5BKY9 247 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 NADSYN1Q6IA69 706 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 NAPEPLDQ6IQ20 393 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 LGI2Q8N0V4 545 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 IGSF8Q969P0 613 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 CYTH2Q99418 400 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 EBNA1BP2Q99848 306 aaKnown RBP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 LRRC3Q9BY71 257 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ACSS3Q9H6R3 686 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ASAH2Q9NR71 780 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 SENP1Q9P0U3 644 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ACTL7BQ9Y614 415 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 PLXNA4Q9HCM2 1894 aa13.78□□□□□ -0.2
CCDC197-201ENST00000359253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 A0A1B0GVM2 712 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 EXOC1LA0A1B0GW35 172 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TLDC2A0PJX2 215 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 ILVBLA1L0T0 632 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 XYLBO75191 536 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 PTPN2P17706 415 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 NR1D1P20393 614 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 ELK3P41970 407 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 GEMIN4P57678 1058 aaKnown RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 MSS51Q4VC12 460 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 ALFQ53S48 1182 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 FAXCQ5TGI0 409 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 KCTD11Q693B1 232 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TMC8Q8IU68 726 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 DENND1CQ8IV53 801 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 FAM217AQ8IXS0 508 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 MICALL1Q8N3F8 863 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 BBS5Q8N3I7 341 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
CCDC197-201ENST00000359253 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.21
CCDC197-201ENST00000359253 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms