RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NTSP30990 170 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ABCG1P45844 678 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 C21orf59P57076 290 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 SRP54P61011 504 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 CDH24Q86UP0 819 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 PANX3Q96QZ0 392 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 SPATC1LQ9H0A9 340 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 AMHP03971 560 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 RPA3P35244 121 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 CDK16Q00536 496 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 KCTD21Q4G0X4 260 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 MARK2Q7KZI7 788 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 GRIN3AQ8TCU5 1115 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ENOPH1Q9UHY7 261 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ANKDD1BA6NHY2 528 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 MFN2O95140 757 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 POM121L1PQ3SYA9 428 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 PROSER1Q86XN7 944 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 DENND6AQ8IWF6 608 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 EPB41L4BQ9H329 900 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ALG9Q9H6U8 611 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 DMGDHQ9UI17 866 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ME2P23368 584 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 IL2P60568 153 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 NDUFAF6Q330K2 333 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 TSHZ1Q6ZSZ6 1077 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 R3HCC1LQ7Z5L2 792 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 PCDH20Q8N6Y1 951 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ZFRQ96KR1 1074 aaKnown RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 DPP7Q9UHL4 492 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 ZNF37AP17032 561 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-202ENST00000359082 BIKQ13323 160 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 RRN3Q9NYV6 651 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 HPSEQ9Y251 543 aa18.65■□□□□ 0.58
SHANK1-202ENST00000359082 PSMD11O00231 422 aa18.64■□□□□ 0.58
SHANK1-202ENST00000359082 H2AFXP16104 143 aaPredicted RBP18.64■□□□□ 0.58
SHANK1-202ENST00000359082 RBL1P28749 1068 aa18.64■□□□□ 0.58
SHANK1-202ENST00000359082 ZC3H7AQ8IWR0 971 aaKnown RBP18.64■□□□□ 0.58
SHANK1-202ENST00000359082 PYDC1Q8WXC3 89 aa18.64■□□□□ 0.58
SHANK1-202ENST00000359082 MTMR8Q96EF0 704 aa18.64■□□□□ 0.58
SHANK1-202ENST00000359082 PPRC1Q5VV67 1664 aaKnown RBP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 SF3B1O75533 1304 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 H3BMM5 538 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ZNF24P17028 368 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ITGA1P56199 1179 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 KCNT2Q6UVM3 1135 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 USP45Q70EL2 814 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 FAM126AQ9BYI3 521 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 KLQ9UEF7 1012 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 CD3EAPO15446 510 aaKnown RBP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
SHANK1-202ENST00000359082 DGCR6Q14129 220 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 DHRSXQ8N5I4 330 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 REEP1Q9H902 201 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 SOHLH2Q9NX45 425 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ANXA6P08133 673 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 DPYSL3Q14195 570 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 MYBPC2Q14324 1141 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 PMF1Q6P1K2 205 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ZDHHC13Q8IUH4 622 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 SAMD3Q8N6K7 520 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 CLIP3Q96DZ5 547 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 ETNK2Q9NVF9 386 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 EHD3Q9NZN3 535 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 EPORP19235 508 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 KIAA0408Q6ZU52 694 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 REPS2Q8NFH8 660 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 BPIFA1Q9NP55 256 aa18.64■□□□□ 0.57
SHANK1-202ENST00000359082 DIP2CQ9Y2E4 1556 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 LOC100506127A0A0U1RQW1 187 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 PROCP04070 461 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 MIPP30301 263 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ZNF844Q08AG5 666 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 INSCQ1MX18 579 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 AADACL2Q6P093 401 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 BTBD9Q96Q07 612 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 UBAP1Q9NZ09 502 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 UXTQ9UBK9 157 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 SH3GLB1Q9Y371 365 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 E5RJQ4 531 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ZW10O43264 779 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 CALCAP01258 141 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 HIST1H2ABP04908 130 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 IFNA16P05015 189 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 TPP2P29144 1249 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 MARSP56192 900 aaKnown RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 PFKFB4Q16877 469 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 HIST3H2AQ7L7L0 130 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 DSG4Q86SJ6 1040 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 KRT73Q86Y46 540 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 HIST1H2ACQ93077 130 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 POPDC2Q9HBU9 364 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 IQCMA0A1B0GVH7 501 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 CYP1A1P04798 512 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms