RNA–Protein interactions for RNA: ENST00000357886.8

CDK5RAP1-203, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK5RAP1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-203ENST00000357886 PDK3Q15120 406 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 LSM12Q3MHD2 195 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 KCNMB4Q86W47 210 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 B3GALNT2Q8NCR0 500 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ZSCAN18Q8TBC5 510 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DPF3Q92784 378 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 VPS39Q96JC1 886 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 HAPLN3Q96S86 360 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 GBA3Q9H227 469 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 VTA1Q9NP79 307 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CHRAC1Q9NRG0 131 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PSMD13Q9UNM6 376 aa13.68□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SCN4AP35499 1836 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TK2O00142 265 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 H2AFYO75367 372 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 GRM3Q14832 879 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ZNF423Q2M1K9 1284 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 MMEL1Q495T6 779 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 XKR4Q5GH76 650 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RASIP1Q5U651 963 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NOTUMQ6P988 496 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ZYG11AQ6WRX3 759 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SNX32Q86XE0 403 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CPSF7Q8N684 471 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 APPL2Q8NEU8 664 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 KCTD13Q8WZ19 329 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 GPR22Q99680 433 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 APOL2Q9BQE5 337 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CENPKQ9BS16 269 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ACE2Q9BYF1 805 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DRC3Q9H069 523 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PRPF19Q9UMS4 504 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RAP2CQ9Y3L5 183 aa13.67□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TARM1B6A8C7 271 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 AIM2O14862 343 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TIMM44O43615 452 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ATP9BO43861 1147 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NPR3P17342 541 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NMBRP28336 390 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 EPHA3P29320 983 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NUDT2P50583 147 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 THOP1P52888 689 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RABGGTBP53611 331 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 FOLH1Q04609 750 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SCAPQ12770 1279 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TLR1Q15399 786 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 KIAA0319Q5VV43 1072 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CLEC20AQ6ZU45 233 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TICAM1Q8IUC6 712 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DSELQ8IZU8 1212 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DNAAF3Q8N9W5 541 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ADAM32Q8TC27 787 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 OSMRQ99650 979 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 FAM49AQ9H0Q0 323 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 IARS2Q9NSE4 1012 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 VPS28Q9UK41 221 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 MAGED2Q9UNF1 606 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 RGSL1A5PLK6 1076 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 GOLGA8TH3BQL2 631 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 HDAC3O15379 428 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CD4P01730 458 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 MMP3P08254 477 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 THRAP10827 490 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TPH1P17752 444 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NFKB1P19838 968 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 IGFBP6P24592 240 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DPP6P42658 865 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 TAF6P49848 677 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 CHN2P52757 468 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PPIL2Q13356 520 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ARL13AQ5H913 290 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 SDCCAG8Q86SQ7 713 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 NTAN1Q96AB6 310 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 DCUN1D1Q96GG9 259 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 ZNF560Q96MR9 790 aa13.66□□□□□ -0.22
CDK5RAP1-203ENST00000357886 GCNAQ96QF7 691 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms