RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MAN1C1Q9NR34 630 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 GDAP2Q9NXN4 497 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 RBPJLQ9UBG7 517 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 RIMS3Q9UJD0 308 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 SCN1AP35498 2009 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 CREB3O43889 395 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 CD4P01730 458 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PTPN3P26045 913 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PNPLA4P41247 253 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PPIDQ08752 370 aaKnown RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 TMEM259Q4ZIN3 620 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 C9orf57Q5W0N0 161 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 BORAQ6PGQ7 559 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 SATL1Q86VE3 508 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 SNX32Q86XE0 403 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 NTAN1Q96AB6 310 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 TNIP3Q96KP6 325 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 ZNF560Q96MR9 790 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 AGAP3Q96P47 875 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 GPR22Q99680 433 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 EPAS1Q99814 870 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 ACE2Q9BYF1 805 aaPredicted RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 DPEP3Q9H4B8 488 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 EFCAB1Q9HAE3 211 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 UBQLN1Q9UMX0 589 aaKnown RBP18.04■□□□□ 0.48
RTN4-204ENST00000357732 NR2E3Q9Y5X4 410 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
RTN4-204ENST00000357732 EEF2KO00418 725 aaKnown RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 AIM2O14862 343 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 ADORA2BP29275 332 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 PMLP29590 882 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 GNL1P36915 607 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 SERPINB5P36952 375 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 LSM12Q3MHD2 195 aaKnown RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 KCNMB4Q86W47 210 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 VPS39Q96JC1 886 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 OXCT2Q9BYC2 517 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 GBA3Q9H227 469 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 CXCL16Q9H2A7 254 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 TLK1Q9UKI8 766 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 CDYLQ9Y232 598 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 ADM5C9JUS6 153 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 ZMPSTE24O75844 475 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 BCAS2O75934 225 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 ME2P23368 584 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 SCAPQ12770 1279 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 LRRC23Q53EV4 343 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 FBXO47Q5MNV8 452 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 SLC27A1Q6PCB7 646 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 DNAAF3Q8N9W5 541 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 KBTBD7Q8WVZ9 684 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 KCTD13Q8WZ19 329 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 HIC2Q96JB3 615 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 ZMAT2Q96NC0 199 aaKnown RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 SNX25Q9H3E2 840 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 MROH8Q9H579 483 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 ZBTB26Q9HCK0 441 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 PIH1D1Q9NWS0 290 aaKnown RBP18.03■□□□□ 0.48
RTN4-204ENST00000357732 THEGQ9P2T0 379 aa18.03■□□□□ 0.48
RTN4-204ENST00000357732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.48
RTN4-204ENST00000357732 PRSS51A0A1B0GVH4 220 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 F5H423 210 aaPredicted RBP18.02■□□□□ 0.48
RTN4-204ENST00000357732 PSMD3O43242 534 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 CYP2B6P20813 491 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 THOP1P52888 689 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 CDC42EP1Q00587 391 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 PEX6Q13608 980 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 OTUD1Q5VV17 481 aaPredicted RBP18.02■□□□□ 0.48
RTN4-204ENST00000357732 CES3Q6UWW8 571 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 B3GNT6Q6ZMB0 384 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 LIMS2Q7Z4I7 341 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 PPTC7Q8NI37 304 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 EZH1Q92800 747 aaPredicted RBP18.02■□□□□ 0.48
RTN4-204ENST00000357732 TOP1MTQ969P6 601 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 SLC2A13Q96QE2 648 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 UTP6Q9NYH9 597 aaKnown RBP18.02■□□□□ 0.48
RTN4-204ENST00000357732 DMTF1Q9Y222 760 aa18.02■□□□□ 0.48
RTN4-204ENST00000357732 MYO18AQ92614 2054 aaKnown RBP18.02■□□□□ 0.47
RTN4-204ENST00000357732 PPEF2O14830 753 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 DDHD2O94830 711 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 CRTAMO95727 393 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 TFAP2AP05549 437 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.47
RTN4-204ENST00000357732 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.47
RTN4-204ENST00000357732 TFEBP19484 476 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 PSMD8P48556 350 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 UGP2Q16851 508 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 ALKAL1Q6UXT8 129 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 STYXQ8WUJ0 223 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 WNT8BQ93098 351 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 HDAC11Q96DB2 347 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 CDRT15Q96T59 188 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 LPIN3Q9BQK8 851 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 RHOJQ9H4E5 214 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 SUDS3Q9H7L9 328 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms