RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 STARD3Q14849 445 aa15.08■□□□□ 0
CHD4-201ENST00000357008 PAN2Q504Q3 1202 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 KBTBD2Q8IY47 623 aa15.08■□□□□ 0
CHD4-201ENST00000357008 SFRP1Q8N474 314 aa15.08■□□□□ 0
CHD4-201ENST00000357008 AADATQ8N5Z0 425 aa15.08■□□□□ 0
CHD4-201ENST00000357008 GLT1D1Q96MS3 346 aa15.08■□□□□ 0
CHD4-201ENST00000357008 SPAG4Q9NPE6 437 aa15.08■□□□□ 0
CHD4-201ENST00000357008 TNPO3Q9Y5L0 923 aaKnown RBP15.08■□□□□ 0
CHD4-201ENST00000357008 EML1O00423 815 aa15.07■□□□□ 0
CHD4-201ENST00000357008 BIRC5O15392 142 aa15.07■□□□□ 0
CHD4-201ENST00000357008 KLRC4O43908 158 aa15.07■□□□□ 0
CHD4-201ENST00000357008 SNAP91O60641 907 aa15.07■□□□□ 0
CHD4-201ENST00000357008 KCNH1O95259 989 aa15.07■□□□□ 0
CHD4-201ENST00000357008 LTA4HP09960 611 aaKnown RBP15.07■□□□□ 0
CHD4-201ENST00000357008 RPL22P35268 128 aaKnown RBP15.07■□□□□ 0
CHD4-201ENST00000357008 PRKCQQ04759 706 aa15.07■□□□□ 0
CHD4-201ENST00000357008 FGD3Q5JSP0 725 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ZNF280DQ6N043 979 aa15.07■□□□□ 0
CHD4-201ENST00000357008 CDH24Q86UP0 819 aa15.07■□□□□ 0
CHD4-201ENST00000357008 AMER2Q8N7J2 671 aa15.07■□□□□ 0
CHD4-201ENST00000357008 MCOLN3Q8TDD5 553 aa15.07■□□□□ 0
CHD4-201ENST00000357008 SERPINB11Q96P15 392 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ITGB6P18564 788 aa15.07■□□□□ 0
CHD4-201ENST00000357008 IL27RAQ6UWB1 636 aa15.07■□□□□ 0
CHD4-201ENST00000357008 TFAP2DQ7Z6R9 452 aa15.07■□□□□ 0
CHD4-201ENST00000357008 FYNP06241 537 aa15.07■□□□□ 0
CHD4-201ENST00000357008 XIAPP98170 497 aa15.07■□□□□ 0
CHD4-201ENST00000357008 PCID2Q5JVF3 399 aa15.07■□□□□ 0
CHD4-201ENST00000357008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.07■□□□□ 05e-7■■■■■ 50.8
CHD4-201ENST00000357008 UCMAQ8WVF2 138 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ASZ1Q8WWH4 475 aa15.07■□□□□ 0
CHD4-201ENST00000357008 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
CHD4-201ENST00000357008 TAF4O00268 1085 aa15.07■□□□□ 0
CHD4-201ENST00000357008 USP12O75317 370 aa15.07■□□□□ 0
CHD4-201ENST00000357008 HPGDP15428 266 aa15.07■□□□□ 0
CHD4-201ENST00000357008 OR1E1P30953 314 aa15.07■□□□□ 0
CHD4-201ENST00000357008 MMP13P45452 471 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ALDH9A1P49189 494 aa15.07■□□□□ 0
CHD4-201ENST00000357008 STX4Q12846 297 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ZNF621Q6ZSS3 439 aa15.07■□□□□ 0
CHD4-201ENST00000357008 GPSM1Q86YR5 675 aa15.07■□□□□ 0
CHD4-201ENST00000357008 TBCDQ9BTW9 1192 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ACSS3Q9H6R3 686 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ATP6V1HQ9UI12 483 aa15.07■□□□□ 0
CHD4-201ENST00000357008 CCNA2P20248 432 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ATP5F1P24539 256 aaPredicted RBP15.07■□□□□ 0
CHD4-201ENST00000357008 GPR15P49685 360 aa15.07■□□□□ 0
CHD4-201ENST00000357008 C1orf186Q6ZWK4 172 aa15.07■□□□□ 0
CHD4-201ENST00000357008 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
CHD4-201ENST00000357008 KAT5Q92993 513 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ATXN3LQ9H3M9 355 aa15.07■□□□□ 0
CHD4-201ENST00000357008 MRPL39Q9NYK5 338 aaKnown RBP15.07■□□□□ 0
CHD4-201ENST00000357008 ZMYM5Q9UJ78 669 aa15.07■□□□□ 0
CHD4-201ENST00000357008 AK5Q9Y6K8 562 aa15.07■□□□□ 0
CHD4-201ENST00000357008 ANKRD63C9JTQ0 380 aa15.06■□□□□ 0
CHD4-201ENST00000357008 EPHB6O15197 1021 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CYP3A4P08684 503 aa15.06■□□□□ 0
CHD4-201ENST00000357008 IFNGR2P38484 337 aa15.06■□□□□ 0
CHD4-201ENST00000357008 GLT6D1Q7Z4J2 308 aa15.06■□□□□ 0
CHD4-201ENST00000357008 ANKRD49Q8WVL7 239 aa15.06■□□□□ 0
CHD4-201ENST00000357008 NACC2Q96BF6 587 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CERS2Q96G23 380 aa15.06■□□□□ 0
CHD4-201ENST00000357008 PNPLA3Q9NST1 481 aa15.06■□□□□ 0
CHD4-201ENST00000357008 TMEM216Q9P0N5 145 aa15.06■□□□□ 0
CHD4-201ENST00000357008 IPPQ9Y573 584 aa15.06■□□□□ 0
CHD4-201ENST00000357008 ZMYM2Q9UBW7 1377 aa15.06■□□□□ 0
CHD4-201ENST00000357008 LIN7AO14910 233 aaPredicted RBP15.06■□□□□ 0
CHD4-201ENST00000357008 STX11O75558 287 aa15.06■□□□□ 0
CHD4-201ENST00000357008 EPN2O95208 641 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
CHD4-201ENST00000357008 GRK4P32298 578 aa15.06■□□□□ 0
CHD4-201ENST00000357008 ATAD3BQ5T9A4 648 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CACTIN-AS1Q8N1I8 211 aa15.06■□□□□ 0
CHD4-201ENST00000357008 TMEM159Q96B96 161 aa15.06■□□□□ 0
CHD4-201ENST00000357008 REPS1Q96D71 796 aa15.06■□□□□ 0
CHD4-201ENST00000357008 POPDC2Q9HBU9 364 aa15.06■□□□□ 0
CHD4-201ENST00000357008 SAE1Q9UBE0 346 aaPredicted RBP15.06■□□□□ 0
CHD4-201ENST00000357008 OPTCQ9UBM4 332 aa15.06■□□□□ 0
CHD4-201ENST00000357008 BCLAF3A2AJT9 711 aaKnown RBP15.06■□□□□ 0
CHD4-201ENST00000357008 HOXA2O43364 376 aa15.06■□□□□ 0
CHD4-201ENST00000357008 NOS3P29474 1203 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CHKAP35790 457 aa15.06■□□□□ 0
CHD4-201ENST00000357008 GUCA1AP43080 201 aaPredicted RBP15.06■□□□□ 0
CHD4-201ENST00000357008 SPIRE1Q08AE8 756 aa15.06■□□□□ 0
CHD4-201ENST00000357008 NR1D2Q14995 579 aa15.06■□□□□ 0
CHD4-201ENST00000357008 SLC30A10Q6XR72 485 aa15.06■□□□□ 0
CHD4-201ENST00000357008 MACC1Q6ZN28 852 aa15.06■□□□□ 0
CHD4-201ENST00000357008 KIAA0408Q6ZU52 694 aa15.06■□□□□ 0
CHD4-201ENST00000357008 IKBIPQ70UQ0 350 aa15.06■□□□□ 0
CHD4-201ENST00000357008 STAG3L4Q8TBR4 150 aa15.06■□□□□ 0
CHD4-201ENST00000357008 SLC2A14Q8TDB8 520 aa15.06■□□□□ 0
CHD4-201ENST00000357008 MED8Q96G25 268 aa15.06■□□□□ 0
CHD4-201ENST00000357008 INPP4AQ96PE3 977 aaPredicted RBP15.06■□□□□ 0
CHD4-201ENST00000357008 OSMRQ99650 979 aa15.06■□□□□ 0
CHD4-201ENST00000357008 OSBPL11Q9BXB4 747 aa15.06■□□□□ 0
CHD4-201ENST00000357008 PHACTR1Q9C0D0 580 aa15.06■□□□□ 0
CHD4-201ENST00000357008 CRNNQ9UBG3 495 aaPredicted RBP15.06■□□□□ 0
CHD4-201ENST00000357008 RSL24D1Q9UHA3 163 aaKnown RBP15.06■□□□□ 0
CHD4-201ENST00000357008 C3orf18Q9UK00 162 aa15.06■□□□□ 0
CHD4-201ENST00000357008 LACTBL1A8MY62 500 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms