RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PWWP2AQ96N64 755 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 ETNK1Q9HBU6 452 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 RAB6BQ9NRW1 208 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 DENND4AQ7Z401 1863 aa18.55■□□□□ 0.56
SMARCD3-202ENST00000356800 MATN3O15232 486 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 STK10O94804 968 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 JCHAINP01591 159 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CCNB1P14635 433 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 POU3F3P20264 500 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 HOXD9P28356 352 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 LTBRP36941 435 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 HSD17B3P37058 310 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 NUMBP49757 651 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 IFI35P80217 286 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 BASP1P80723 227 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 GAD2Q05329 585 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 KCNJ11Q14654 390 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 TEX44Q53QW1 395 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 FSCBQ5H9T9 825 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 FAM78AQ5JUQ0 283 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 RNF43Q68DV7 783 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 ARHGEF18Q6ZSZ5 1173 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 TPGS1Q6ZTW0 290 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CEP128Q6ZU80 1094 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 SETD3Q86TU7 594 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 RELL1Q8IUW5 271 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 PPIL6Q8IXY8 311 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CNTD1Q8N815 330 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 WFDC5Q8TCV5 224 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 IL12RB2Q99665 862 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 FERMT1Q9BQL6 677 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 MAGEH1Q9H213 219 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 LINC00597Q9H2U6 94 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 ATP8A1Q9Y2Q0 1164 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 ILVBLA1L0T0 632 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 GOLGA6BA6NDN3 693 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 F5H423 210 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 ZBTB24O43167 697 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 TMEM63AO94886 807 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 LUC7L3O95232 432 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 RHOCP08134 193 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CD68P34810 354 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 VIPR2P41587 438 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 COL19A1Q14993 1142 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 UAP1Q16222 522 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 SYCP2LQ5T4T6 812 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 C6orf118Q5T5N4 469 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 PID1Q7Z2X4 250 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CARNMT1Q8N4J0 409 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CELF5Q8N6W0 485 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 USP33Q8TEY7 942 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 DDI1Q8WTU0 396 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 MAML1Q92585 1016 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 FATE1Q969F0 183 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 ASB16Q96NS5 453 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 AGAP3Q96P47 875 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 CLDND1Q9NY35 253 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 PLK2Q9NYY3 685 aa18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 KLHL8Q9P2G9 620 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-202ENST00000356800 BRWD1Q9NSI6 2320 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 MAGEA6P43360 314 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 PMS2P54278 862 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 GPS2Q13227 327 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 MPPE1Q53F39 396 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 MPP7Q5T2T1 576 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 CFAP58Q5T655 872 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 FYB2Q5VWT5 728 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 TIGD7Q6NT04 549 aaPredicted RBP18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 TEKT5Q96M29 485 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 VAT1Q99536 393 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 GORASP1Q9BQQ3 440 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 PABPC3Q9H361 631 aaKnown RBP18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 KIF9Q9HAQ2 790 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 GDE1Q9NZC3 331 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 CLEC4EQ9ULY5 219 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 WNT6Q9Y6F9 365 aa18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 KIF26AQ9ULI4 1882 aaPredicted RBP18.53■□□□□ 0.56
SMARCD3-202ENST00000356800 TYW5A2RUC4 315 aaKnown RBP18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 H0Y626 953 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 PRAMEF11O60813 436 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 PSMB4P28070 264 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 IL10RBQ08334 325 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 SEMA5AQ13591 1074 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 RNF219Q5W0B1 726 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 TRMT10CQ7L0Y3 403 aaKnown RBP18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 TMEM25Q86YD3 366 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 SMARCD2Q92925 531 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 ACE2Q9BYF1 805 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 PHACTR1Q9C0D0 580 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 SP110Q9HB58 689 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 PDFQ9HBH1 243 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 OGFRQ9NZT2 677 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 IGSF9Q9P2J2 1179 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 TRHDEQ9UKU6 1024 aa18.52■□□□□ 0.56
SMARCD3-202ENST00000356800 GOLGA8MH3BSY2 632 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 AGPSO00116 658 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 CHADO15335 359 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 GLDCP23378 1020 aa18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 MZF1P28698 734 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-202ENST00000356800 PARP6Q2NL67 630 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms