RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 HMG20AQ9NP66 347 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CATSPERZQ9NTU4 200 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 VAV3Q9UKW4 847 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ARHGAP23Q9P227 1491 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TMEM191CA6NGB0 347 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 BTNL10A8MVZ5 291 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF185O15231 689 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SLC37A4O43826 429 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SNUPNO95149 360 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SGPL1O95470 568 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KELP23276 732 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PIK3R1P27986 724 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ACSM2AQ08AH3 577 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF268Q14587 947 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 NDUFA5Q16718 116 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SLC44A4Q53GD3 710 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ACSM2BQ68CK6 577 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF470Q6ECI4 717 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 COL23A1Q86Y22 540 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CCDC185Q8N715 623 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SPPL2AQ8TCT8 520 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SEC16BQ96JE7 1060 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 VAT1Q99536 393 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PRRG4Q9BZD6 226 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CEP44Q9C0F1 390 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ROGDIQ9GZN7 287 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 POLR1EQ9GZS1 481 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CISHQ9NSE2 258 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ARL15Q9NXU5 204 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ETAA1Q9NY74 926 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PSME2Q9UL46 239 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 MRPS33Q9Y291 106 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SLC9A8Q9Y2E8 581 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TMX2Q9Y320 296 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 C3P01024 1663 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 GSAPA4D1B5 854 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF862O60290 1169 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TPST1O60507 370 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ATG7O95352 703 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 GZMAP12544 262 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 VHLP40337 213 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 MYL6P60660 151 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CMPK2Q5EBM0 449 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SCARA3Q6AZY7 606 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 FBXO42Q6P3S6 717 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 EFCAB3Q8N7B9 438 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 FNDC5Q8NAU1 212 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 COLGALT1Q8NBJ5 622 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TPCN2Q8NHX9 752 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ERLEC1Q96DZ1 483 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PDGFDQ9GZP0 370 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KLHL25Q9H0H3 589 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF214Q9UL59 606 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ANGPT4Q9Y264 503 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SLIT3O75094 1523 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CHD2O14647 1828 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CCDC154A6NI56 674 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KLHL18O94889 574 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 MAPTP10636 758 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PPP4CP60510 307 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KLC1Q07866 573 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 GRM3Q14832 879 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TEAD4Q15561 434 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ATP13A4Q4VNC1 1196 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 C2CD6Q53TS8 623 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ULK2Q8IYT8 1036 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 EID3Q8N140 333 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TPD52L3Q96J77 140 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TTLL2Q9BWV7 592 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KIAA1683Q9H0B3 1180 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TSPAN16Q9UKR8 245 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CD3EAPO15446 510 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ERVK-9P63128 1117 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PTSQ03393 145 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ITPK1Q13572 414 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TTMPQ5BVD1 217 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KCNT1Q5JUK3 1230 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 OLFML2BQ68BL8 750 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 IQSEC1Q6DN90 963 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CORO1BQ9BR76 489 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ATP13A3Q9H7F0 1226 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 MID1IP1Q9NPA3 183 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 GPRC5CQ9NQ84 441 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 LRRC37A3O60309 1634 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 SLC15A5A6NIM6 579 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 BTN3A1O00481 513 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 FTH1P02794 183 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CDC25CP30307 473 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PTGES3Q15185 160 aaKnown RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 C11orf63Q6NUN7 778 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF605Q86T29 641 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PALB2Q86YC2 1186 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 FAM126AQ9BYI3 521 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-202ENST00000356435 KCNN2Q9H2S1 579 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 TMEM216Q9P0N5 145 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CPA3P15088 417 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 PON1P27169 355 aa5.62□□□□□ -1.51
PTPRD-202ENST00000356435 CHKAP35790 457 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms