RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TEX28O15482 410 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 MOCS2O96007 188 aaPredicted RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 CDH4P55283 916 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 MPP3Q13368 585 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 SERINC3Q13530 473 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 MPP2Q14168 576 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 TMCO4Q5TGY1 634 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF783Q6ZMS7 281 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 LRRC6Q86X45 466 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 DEPDC1BQ8WUY9 529 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 CKAP2Q8WWK9 683 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 SLC25A51Q9H1U9 297 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 TRABDQ9H4I3 376 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 SMYD2Q9NRG4 433 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 FAM47DPA6NHR8 397 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 SOBPA7XYQ1 873 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 DFFAO00273 331 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 GREM1O60565 184 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 STC2O76061 302 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 SLC11A2P49281 568 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 PABPC1LQ4VXU2 614 aaKnown RBP17.56■□□□□ 0.4
VPS13B-201ENST00000355155 RAP1GAP2Q684P5 730 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 RNF43Q68DV7 783 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 DNAJB7Q7Z6W7 309 aaPredicted RBP17.56■□□□□ 0.4
VPS13B-201ENST00000355155 MDM1Q8TC05 714 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 IL22Q9GZX6 179 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 MAGEH1Q9H213 219 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 RWDD3Q9Y3V2 267 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 NUP205Q92621 2012 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 C5orf67F2Z3F1 127 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 CNTN5O94779 1100 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 CREB1P16220 341 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 RENBPP51606 427 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 UBE3AQ05086 875 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 TWF1Q12792 350 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 TMCO2Q7Z6W1 182 aaPredicted RBP17.56■□□□□ 0.4
VPS13B-201ENST00000355155 RAD9AQ99638 391 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 DDX50Q9BQ39 737 aaKnown RBP17.56■□□□□ 0.4
VPS13B-201ENST00000355155 KIFC1Q9BW19 673 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 VPS45Q9NRW7 570 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 PRKAG3Q9UGI9 489 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 SOX13Q9UN79 622 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 FAM169AQ9Y6X4 670 aa17.56■□□□□ 0.4
VPS13B-201ENST00000355155 ATXN2Q99700 1313 aaKnown RBP17.55■□□□□ 0.4
VPS13B-201ENST00000355155 F5H5T6 163 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 PAPLNO95428 1278 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 POU2F2P09086 479 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 MGAT1P26572 445 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 CDH17Q12864 832 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 GLIPR1L2Q4G1C9 344 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 KDELC1Q6UW63 502 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 Q6ZNB5 142 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
VPS13B-201ENST00000355155 MIB1Q86YT6 1006 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 TMC8Q8IU68 726 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 BANPQ8N9N5 519 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 ISL2Q96A47 359 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 HMCESQ96FZ2 354 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 IMP4Q96G21 291 aaKnown RBP17.55■□□□□ 0.4
VPS13B-201ENST00000355155 CFAP36Q96G28 342 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF512Q96ME7 567 aaPredicted RBP17.55■□□□□ 0.4
VPS13B-201ENST00000355155 SELENOSQ9BQE4 189 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 SYBUQ9NX95 663 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 PRAMEF11O60813 436 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 ASMTLO95671 621 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 HLA-DQB2P05538 268 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 SLC6A4P31645 630 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 HARS2P49590 506 aaKnown RBP17.55■□□□□ 0.4
VPS13B-201ENST00000355155 KCNQ1P51787 676 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 CRYMQ14894 314 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 DENND5AQ6IQ26 1287 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 RANBP9Q96S59 729 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 MCMBPQ9BTE3 642 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 CEP41Q9BYV8 373 aa17.55■□□□□ 0.4
VPS13B-201ENST00000355155 CXorf51AA0A1B0GTR3 108 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 C2CD2LO14523 706 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 TM9SF1O15321 606 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 ZWINTO95229 277 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 DRD4P21917 467 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 RABGAP1LQ5R372 815 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 CHSY1Q86X52 802 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 SRRM1Q8IYB3 904 aaKnown RBP17.54■□□□□ 0.4
VPS13B-201ENST00000355155 AGAP3Q96P47 875 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 KLHL5Q96PQ7 755 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 SMC6Q96SB8 1091 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 BFARQ9NZS9 450 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 MAGED2Q9UNF1 606 aaPredicted RBP17.54■□□□□ 0.4
VPS13B-201ENST00000355155 TBC1D30Q9Y2I9 924 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 BRCA2P51587 3418 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 ELF1P32519 619 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 ZSCAN26Q16670 478 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 LGSNQ5TDP6 509 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 CCDC149Q6ZUS6 474 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 SETD3Q86TU7 594 aaPredicted RBP17.54■□□□□ 0.4
VPS13B-201ENST00000355155 SPATS2Q86XZ4 545 aaKnown RBP17.54■□□□□ 0.4
VPS13B-201ENST00000355155 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 OR52K1Q8NGK4 314 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 MYEOVQ96EZ4 313 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 CHMP6Q96FZ7 201 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms