RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 RUBCNQ92622 972 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 KCNF1Q9H3M0 494 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 NRDE2Q9H7Z3 1164 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 HPS4Q9NQG7 708 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 PHPT1Q9NRX4 125 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 SAE1Q9UBE0 346 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 ERVW-1Q9UQF0 538 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 HNRNPCL2B2RXH8 293 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 HNRNPCL1O60812 293 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 C4BPAP04003 597 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 NFKB1P19838 968 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 PSMB4P28070 264 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CAPZA2P47755 286 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 ANXA11P50995 505 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 RABGGTBP53611 331 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 FMO1Q01740 532 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CHI3L2Q15782 390 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CYP2A13Q16696 494 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 GRAMD1BQ3KR37 738 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 KRT80Q6KB66 452 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 GRASPQ7Z6J2 395 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 ZNF655Q8N720 491 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 OR10G6Q8NH81 332 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 HMGB4Q8WW32 186 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 NR1H4Q96RI1 486 aaPredicted RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 FGFBP2Q9BYJ0 223 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 RHBGQ9H310 441 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 MIEF1Q9NQG6 463 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 STX18Q9P2W9 335 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 DCDC2Q9UHG0 476 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 GSAPA4D1B5 854 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 F8W810 466 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 ENPP3O14638 875 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 IQCF3P0C7M6 154 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 TPBGLP0DKB5 382 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 LMO2P25791 158 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 MAPK1P28482 360 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CRY1Q16526 586 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CRTC3Q6UUV7 619 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 COLGALT2Q8IYK4 626 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 DQX1Q8TE96 717 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 E2F7Q96AV8 911 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 HNRNPABQ99729 332 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 ST6GALNAC4Q9H4F1 302 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 ZMYM5Q9UJ78 669 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 SLC35G4P0C7Q5 338 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 WARSP23381 471 aaKnown RBP9.87□□□□□ -0.83
GABPA-201ENST00000354828 LVRNQ6Q4G3 990 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 CYP4X1Q8N118 509 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 FUBP3Q96I24 572 aaKnown RBP eCLIP9.87□□□□□ -0.83
GABPA-201ENST00000354828 KCNK16Q96T55 309 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 WHRNQ9P202 907 aa9.87□□□□□ -0.83
GABPA-201ENST00000354828 RNF103-CHMP3A0A140T963 221 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 H3BMM5 538 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 ERBB2P04626 1255 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 MLNP12872 115 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 RPL7AP62424 266 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 PLIN5Q00G26 463 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 PDCD2Q16342 344 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 PDPK2PQ6A1A2 396 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 PSTKQ8IV42 348 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 RIBC1Q8N443 379 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 MAGED4Q96JG8 741 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 ROPN1BQ9BZX4 212 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 ROPN1Q9HAT0 212 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 CHCHD3Q9NX63 227 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 ARL15Q9NXU5 204 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.86□□□□□ -0.83
GABPA-201ENST00000354828 SIK3Q9Y2K2 1263 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 HBS1LQ9Y450 684 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 BTAF1O14981 1849 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 A0A088AWK7 358 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 KATNA1O75449 491 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 LMNAP02545 664 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 PGAM1P18669 254 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 ZNF10P21506 573 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 CES1P23141 567 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 TIE1P35590 1138 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 MTHFRP42898 656 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 ELP6Q0PNE2 266 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 USP4Q13107 963 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 TMEM259Q4ZIN3 620 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 TAPT1Q6NXT6 567 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 LINGO4Q6UY18 593 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 ANKS1BQ7Z6G8 1248 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 TMEM192Q8IY95 271 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 KATNAL2Q8IYT4 538 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 KLHL23Q8NBE8 558 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 VMP1Q96GC9 406 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 C17orf80Q9BSJ5 609 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 MRPL1Q9BYD6 325 aaKnown RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 RASSF4Q9H2L5 321 aa9.86□□□□□ -0.83
GABPA-201ENST00000354828 EVLQ9UI08 416 aaPredicted RBP9.86□□□□□ -0.83
GABPA-201ENST00000354828 SLC27A6Q9Y2P4 619 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms