RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 OR6B2Q6IFH4 312 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 EID2Q8N6I1 236 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 PIP4K2CQ8TBX8 421 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
PDGFA-201ENST00000354513 OR8D1Q8WZ84 308 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 FAM81BQ96LP2 452 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 BBC3Q96PG8 261 aaPredicted RBP16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 TMPRSS4Q9NRS4 437 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 ARHGEF38Q9NXL2 777 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 CA5BQ9Y2D0 317 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 ATRXP46100 2492 aa16.3■□□□□ 0.2
PDGFA-201ENST00000354513 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 LRRK1Q38SD2 2015 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3DA0A087WVF3 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3IA0A087WXS9 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3EA0A087X179 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3KA0A087X1G2 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3FA6NER0 549 aaPredicted RBP16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3LB9A6J9 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 M0QYT0 321 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 FOXN3O00409 490 aaPredicted RBP16.29■□□□□ 0.2
PDGFA-201ENST00000354513 SLC7A4O43246 635 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 SNAP91O60641 907 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
PDGFA-201ENST00000354513 MT-CO1P00395 513 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 ITGAVP06756 1048 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3HP0C7X1 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 NOS2P35228 1153 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 CAMK4Q16566 473 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 MIIPQ5JXC2 388 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3GQ6DHY5 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3CQ6IPX1 549 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TBC1D3Q8IZP1 549 aaPredicted RBP16.29■□□□□ 0.2
PDGFA-201ENST00000354513 MFSD2AQ8NA29 543 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 NT5C3BQ969T7 300 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 ARRDC3Q96B67 414 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 KDM4CQ9H3R0 1056 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 ERVMER34-1Q9H9K5 563 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 ZNF212Q9UDV6 495 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 SLC12A6Q9UHW9 1150 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 SLC25A13Q9UJS0 675 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 HS3ST2Q9Y278 367 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 PCDHGA1Q9Y5H4 931 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 TRPM6Q9BX84 2022 aa16.29■□□□□ 0.2
PDGFA-201ENST00000354513 FAM170AA1A519 330 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 K7ERQ8 282 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 MCF2LO15068 1137 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 ALOX15BO15296 676 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 RFPL3O75679 317 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 LDOC1O95751 146 aaPredicted RBP16.28■□□□□ 0.2
PDGFA-201ENST00000354513 CDH5P33151 784 aaPredicted RBP16.28■□□□□ 0.2
PDGFA-201ENST00000354513 NNMTP40261 264 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 CXCR3P49682 368 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 BNIPLQ7Z465 357 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 FAM71AQ8IYT1 594 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 PDCD7Q8N8D1 485 aaKnown RBP16.28■□□□□ 0.2
PDGFA-201ENST00000354513 RNF34Q969K3 372 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 VPS51Q9UID3 782 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 VPS28Q9UK41 221 aa16.28■□□□□ 0.2
PDGFA-201ENST00000354513 TPX2Q9ULW0 747 aaKnown RBP16.28■□□□□ 0.2
PDGFA-201ENST00000354513 A0A087WV48 116 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.27■□□□□ 0.2
PDGFA-201ENST00000354513 GOLGA6L22H0YM25 854 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 YKT6O15498 198 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
PDGFA-201ENST00000354513 CLDN11O75508 207 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 GLDCP23378 1020 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 CDH4P55283 916 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 OXCT1P55809 520 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 PTK2Q05397 1052 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 KCNMA1Q12791 1236 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 ZNF177Q13360 481 aaPredicted RBP16.27■□□□□ 0.2
PDGFA-201ENST00000354513 ACCSLQ4AC99 568 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.2
PDGFA-201ENST00000354513 TMPRSS12Q86WS5 348 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 CHST14Q8NCH0 376 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 OR2A12Q8NGT7 310 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 SKA1Q96BD8 255 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 PGAP3Q96FM1 320 aaPredicted RBP16.27■□□□□ 0.2
PDGFA-201ENST00000354513 TBCBQ99426 244 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 TKTL2Q9H0I9 626 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 SIK2Q9H0K1 926 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 DMTF1Q9Y222 760 aa16.27■□□□□ 0.2
PDGFA-201ENST00000354513 LRP4O75096 1905 aa16.27■□□□□ 0.19
PDGFA-201ENST00000354513 IGLV3-10A0A075B6K4 115 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 A0A0D9SEW6 157 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 DRGXA6NNA5 263 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 SDC3O75056 442 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 ZNF821O75541 412 aaPredicted RBP16.26■□□□□ 0.19
PDGFA-201ENST00000354513 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
PDGFA-201ENST00000354513 GABRB2P47870 512 aa16.26■□□□□ 0.19
PDGFA-201ENST00000354513 SULT1E1P49888 294 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms