RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CNTD1Q8N815 330 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 IL12RB2Q99665 862 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 GORASP1Q9BQQ3 440 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 WDR83Q9BRX9 315 aaKnown RBP20.98■□□□□ 0.95
TRIM4-202ENST00000354241 TMBIM4Q9HC24 238 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 ZDHHC7Q9NXF8 308 aa20.98■□□□□ 0.95
TRIM4-202ENST00000354241 CEP290O15078 2479 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 NOTCH4Q99466 2003 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 CCDC195A0A1B0GUA6 201 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 SMIM23A6NLE4 172 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 CLDN11O75508 207 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 ACVRL1P37023 503 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 ELK3P41970 407 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 GRIA1P42261 906 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 NUMBP49757 651 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 NTHL1P78549 312 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 CDK16Q00536 496 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 GRASPQ7Z6J2 395 aaPredicted RBP20.97■□□□□ 0.95
TRIM4-202ENST00000354241 PABPC5Q96DU9 382 aaKnown RBP20.97■□□□□ 0.95
TRIM4-202ENST00000354241 PRKD2Q9BZL6 878 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 RETREG1Q9H6L5 497 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 SLC28A3Q9HAS3 691 aa20.97■□□□□ 0.95
TRIM4-202ENST00000354241 RBM22Q9NW64 420 aaKnown RBP eCLIP20.97■□□□□ 0.959e-6■□□□□ 9.6
TRIM4-202ENST00000354241 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 A0A1B0GVM2 712 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 TLDC2A0PJX2 215 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 TCAF2A6NFQ2 919 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 MOSPD3O75425 235 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 DDX6P26196 483 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 NRIP1P48552 1158 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 ZNF177Q13360 481 aaPredicted RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 SERINC3Q13530 473 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 SPARCL1Q14515 664 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 PRPSAP1Q14558 356 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 SLC5A9Q2M3M2 681 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 DNAJC21Q5F1R6 531 aaKnown RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 CHST9Q7L1S5 443 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 OTOP3Q7RTS5 596 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 PALM2Q8IXS6 379 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 LEMD2Q8NC56 503 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 MAML1Q92585 1016 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 LMAN2LQ9H0V9 348 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 XAB2Q9HCS7 855 aaKnown RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 CHD5Q8TDI0 1954 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 CHD7Q9P2D1 2997 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 A0A087WUV0 522 aaPredicted RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 LEFTY2O00292 366 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 TBL1XO60907 577 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 HLA-DQB2P05538 268 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 RHOCP08134 193 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 ABHD2P08910 425 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 AVPR1AP37288 418 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 GNA12Q03113 381 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 CCDC38Q502W7 563 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 C6orf118Q5T5N4 469 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 TTC39BQ5VTQ0 682 aaPredicted RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 KCTD16Q68DU8 428 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 IGDCC3Q8IVU1 814 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 ATP11CQ8NB49 1132 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 EPS8L3Q8TE67 593 aaKnown RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 NSMCE1Q8WV22 266 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 ARHGEF2Q92974 986 aaKnown RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 ZNF419Q96HQ0 510 aaPredicted RBP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 VPS18Q9P253 973 aa20.96■□□□□ 0.95
TRIM4-202ENST00000354241 BCCIPQ9P287 314 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRIM4-202ENST00000354241 A0A0D9SEW6 157 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 EPOPA6NHQ4 379 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 SKIDA1Q1XH10 827 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 HTR3DQ70Z44 454 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 CMTM8Q8IZV2 173 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 AGGF1Q8N302 714 aaeCLIP20.95■□□□□ 0.94
TRIM4-202ENST00000354241 OR7D4Q8NG98 312 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 OR52K2Q8NGK3 314 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 MLPHQ9BV36 600 aaPredicted RBP20.95■□□□□ 0.94
TRIM4-202ENST00000354241 MAGEH1Q9H213 219 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 TASP1Q9H6P5 420 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 PIDD1Q9HB75 910 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 GLOD4Q9HC38 313 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 ARHGAP26Q9UNA1 814 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 ZNF510Q9Y2H8 683 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 TEX264Q9Y6I9 313 aa20.95■□□□□ 0.94
TRIM4-202ENST00000354241 TYW5A2RUC4 315 aaKnown RBP20.94■□□□□ 0.94
TRIM4-202ENST00000354241 AP2A1O95782 977 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 PEX11BO96011 259 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 SSTR1P30872 391 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 SLCO1A2P46721 670 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 RENBPP51606 427 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 GPX6P59796 221 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 IL10RBQ08334 325 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 DUSP6Q16828 381 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 LONRF1Q17RB8 773 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 IL31Q6EBC2 164 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 LEKR1Q6ZMV7 388 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 BBS7Q8IWZ6 715 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 HJURPQ8NCD3 748 aaPredicted RBP20.94■□□□□ 0.94
TRIM4-202ENST00000354241 ZNF707Q96C28 371 aaPredicted RBP20.94■□□□□ 0.94
TRIM4-202ENST00000354241 PIH1D1Q9NWS0 290 aaKnown RBP20.94■□□□□ 0.94
TRIM4-202ENST00000354241 UBP1Q9NZI7 540 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 GOLGA6CA6NDK9 693 aa20.94■□□□□ 0.94
TRIM4-202ENST00000354241 RASGRF2O14827 1237 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms