RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 GKN1Q9NS71 199 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 TRANK1O15050 2925 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 KCNK1O00180 336 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 ALDH3A1P30838 453 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PHBP35232 272 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 IRS1P35568 1242 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 TUBP50607 506 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 VEPH1Q14D04 833 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 SLC45A4Q5BKX6 768 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 HEATR6Q6AI08 1181 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 MIEF2Q96C03 454 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 OLFM3Q96PB7 478 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 CYP2S1Q96SQ9 504 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 OSBPL2Q9H1P3 480 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 SSU72Q9NP77 194 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBA3-201ENST00000349511 MYO9BQ13459 2157 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 E9PAM4 449 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 COCHO43405 550 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 PIAS1O75925 651 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 ZWINTO95229 277 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 APOEP02649 317 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 CA3P07451 260 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 T-ENOLP0DO92 83 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 ATP5C1P36542 298 aaKnown RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 ARL4CP56559 192 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 PAFAH1B3Q15102 231 aaKnown RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 MS4A13Q5J8X5 152 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 RAP1GAP2Q684P5 730 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 ADGRD1Q6QNK2 874 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 TFAP2DQ7Z6R9 452 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.21
UBA3-201ENST00000349511 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 INPP5DQ92835 1189 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 KLHL5Q96PQ7 755 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 WDR83Q9BRX9 315 aaKnown RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 TRPC7Q9HCX4 862 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 ZNF334Q9HCZ1 680 aaPredicted RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 OLA1Q9NTK5 396 aaKnown RBP13.71□□□□□ -0.21
UBA3-201ENST00000349511 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 FETUBQ9UGM5 382 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 NEU3Q9UQ49 428 aa13.71□□□□□ -0.21
UBA3-201ENST00000349511 IRF1P10914 325 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 EPHB3P54753 998 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 MLLT6P55198 1093 aaPredicted RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 CRYMQ14894 314 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 SHHQ15465 462 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 TRIP4Q15650 581 aaPredicted RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 HECTD3Q5T447 861 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 C3orf62Q6ZUJ4 267 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 CIR1Q86X95 450 aaPredicted RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBA3-201ENST00000349511 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 FBXO36Q8NEA4 188 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 MZB1Q8WU39 189 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 HTR3CQ8WXA8 447 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 SLC7A6OSQ96CW6 309 aaPredicted RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 MYEOVQ96EZ4 313 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 P2RY11Q96G91 374 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 QKIQ96PU8 341 aaKnown RBP eCLIP13.7□□□□□ -0.221e-6■■■■□ 23.1
UBA3-201ENST00000349511 PAFAH2Q99487 392 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 DHRS4Q9BTZ2 278 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 COMMD8Q9NX08 183 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 DFFAO00273 331 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 GRM6O15303 877 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 GJA1P17302 382 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ADRA1DP25100 572 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 HCAR3P49019 387 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 KLHL38Q2WGJ6 581 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ARTNQ5T4W7 220 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ZNF449Q6P9G9 518 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ARHGAP36Q6ZRI8 547 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 TMEM150AQ86TG1 271 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 SLC22A17Q8WUG5 538 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 PSMG2Q969U7 264 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 PHACTR1Q9C0D0 580 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
UBA3-201ENST00000349511 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
UBA3-201ENST00000349511 ANAPC1Q9H1A4 1944 aa13.69□□□□□ -0.22
UBA3-201ENST00000349511 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
UBA3-201ENST00000349511 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
UBA3-201ENST00000349511 E7ESA3 106 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms