RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PITPNM1O00562 1244 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 ANXA9O76027 345 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 UNC5CO95185 931 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 CPB1P15086 417 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 YWHAQP27348 245 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 SLC11A1P49279 550 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 TBX4P57082 545 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 PDE1BQ01064 536 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 SPDYAQ5MJ70 313 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 NUDCD3Q8IVD9 361 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 ATP2A3Q93084 1043 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 E2F7Q96AV8 911 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 GLOD4Q9HC38 313 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 CLIC5Q9NZA1 410 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 MPP6Q9NZW5 540 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 DCTN4Q9UJW0 460 aa20.76■□□□□ 0.91
CHRNA3-202ENST00000348639 GLRA3O75311 464 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 RTN3O95197 1032 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 BPGMP07738 259 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 CCL23P55773 120 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 PDE1CQ14123 709 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 DBN1Q16643 649 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 ASRGL1Q7L266 308 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 KLHL29Q96CT2 875 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 MFSD3Q96ES6 412 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 ZNF419Q96HQ0 510 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 C7orf26Q96N11 449 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 PPP1R2P1Q96PQ5 205 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 TXLNGQ9NUQ3 528 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 DCDC2Q9UHG0 476 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 SLC27A5Q9Y2P5 690 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 TBKBP1A7MCY6 615 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 ATP5HO75947 161 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 TPH1P17752 444 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 GPR17Q13304 367 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 TEDDM1Q5T9Z0 273 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 FUT10Q6P4F1 479 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 TBC1D1Q86TI0 1168 aaPredicted RBP20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 ZNF683Q8IZ20 524 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 SPATA22Q8NHS9 363 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 SPPL2BQ8TCT7 592 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 FBXO32Q969P5 355 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 RBBP8Q99708 897 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 CHRAC1Q9NRG0 131 aa20.75■□□□□ 0.91
CHRNA3-202ENST00000348639 HOXA2O43364 376 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 TOP3BO95985 862 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 DLDP09622 509 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 NQO1P15559 274 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 SPRP35270 261 aaPredicted RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 PSEN1P49768 467 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 PAPOLAP51003 745 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 ELF3P78545 371 aaPredicted RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 TMPRSS15P98073 1019 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 SMARCB1Q12824 385 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 ELAVL2Q12926 359 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 CHI3L2Q15782 390 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 SMAD1Q15797 465 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 CRIPAKQ8N1N5 446 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 ISL2Q96A47 359 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 KIFC1Q9BW19 673 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 KCNK13Q9HB14 408 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 ARHGEF3Q9NR81 526 aa20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 OLA1Q9NTK5 396 aaKnown RBP20.74■□□□□ 0.91
CHRNA3-202ENST00000348639 A0A0G2JND7 137 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MTMR11A4FU01 709 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TBC1D4O60343 1298 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 BST1Q10588 318 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 EFEMP1Q12805 493 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 INSCQ1MX18 579 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MGAT5BQ3V5L5 792 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 STRA8Q7Z7C7 330 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 NPAS4Q8IUM7 802 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 UMODL1-AS1Q8N2C9 162 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 SPATA17Q96L03 361 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 SEPT5Q99719 369 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TBL1YQ9BQ87 522 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TLR8Q9NR97 1041 aaKnown RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 PPARGC1AQ9UBK2 798 aaKnown RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MTO1Q9Y2Z2 717 aaKnown RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MGRN1O60291 552 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MT-CYBP00156 380 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TYK2P29597 1187 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MAGEA12P43365 314 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 ARFIP2P53365 341 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 LIMK2P53671 638 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 GEMP55040 296 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 KCNJ2P63252 427 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TRIP4Q15650 581 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 ANO4Q32M45 955 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 HSP90AA5PQ58FG0 334 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MS4A13Q5J8X5 152 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 KCNMB4Q86W47 210 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TMEM173Q86WV6 379 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 ATP6V0D2Q8N8Y2 350 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 AGAP2Q99490 1192 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 TMEM175Q9BSA9 504 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms