RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CD68P34810 354 aaPredicted RBP19.07■□□□□ 0.64
PTN-201ENST00000348225 ELK3P41970 407 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 MAGEA3P43357 314 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 RENBPP51606 427 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 IL10RBQ08334 325 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 HNRNPDQ14103 355 aaKnown RBP19.07■□□□□ 0.64
PTN-201ENST00000348225 RAB30Q15771 203 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 ZNF534Q76KX8 674 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 TNS4Q8IZW8 715 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 PGM2Q96G03 612 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 LMAN2LQ9H0V9 348 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 MAGEH1Q9H213 219 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 BCCIPQ9P287 314 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTN-201ENST00000348225 MSRAQ9UJ68 235 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 SH3BP1Q9Y3L3 701 aa19.07■□□□□ 0.64
PTN-201ENST00000348225 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 TLDC2A0PJX2 215 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 RGS16O15492 202 aaPredicted RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 AVILO75366 819 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 SUN1O94901 812 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 CPP00450 1065 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 POU2F2P09086 479 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 SERINC3Q13530 473 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 Q6ZNB5 142 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 CNTD1Q8N815 330 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 FAM76AQ8TAV0 307 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 ADAMTS19Q8TE59 1207 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 EPS8L3Q8TE67 593 aaKnown RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 WBP2Q969T9 261 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 WDR83Q9BRX9 315 aaKnown RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 PPCSQ9HAB8 311 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 GLOD4Q9HC38 313 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 RBM22Q9NW64 420 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTN-201ENST00000348225 HCFC1R1Q9NWW0 138 aa19.06■□□□□ 0.64
PTN-201ENST00000348225 AAR2Q9Y312 384 aaKnown RBP19.06■□□□□ 0.64
PTN-201ENST00000348225 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 SMIM23A6NLE4 172 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 SOBPA7XYQ1 873 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 CACNG3O60359 315 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 ANXA9O76027 345 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 IFNAR2P48551 515 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 RPS24P62847 133 aaKnown RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 ZNF177Q13360 481 aaPredicted RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 MTM1Q13496 603 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 KCTD16Q68DU8 428 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 SETD3Q86TU7 594 aaPredicted RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 HJURPQ8NCD3 748 aaPredicted RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 SHKBP1Q8TBC3 707 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 FCRL5Q96RD9 977 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 LRRC40Q9H9A6 602 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 TTLL3Q9Y4R7 772 aa19.05■□□□□ 0.64
PTN-201ENST00000348225 HELZP42694 1942 aaKnown RBP19.05■□□□□ 0.64
PTN-201ENST00000348225 EXOC1LA0A1B0GW35 172 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 AP3B1O00203 1094 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 TRDMT1O14717 391 aaKnown RBP19.04■□□□□ 0.64
PTN-201ENST00000348225 GREM1O60565 184 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 TSPAN3O60637 253 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 RHOP08100 348 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 RHOCP08134 193 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 GSTA2P09210 222 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 GJA1P17302 382 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 PBX2P40425 430 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 GPX6P59796 221 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 GNA12Q03113 381 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 LONRF1Q17RB8 773 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 GPR158Q5T848 1215 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 MARC1Q5VT66 337 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 C3orf62Q6ZUJ4 267 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 HTR3DQ70Z44 454 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 FAM217AQ8IXS0 508 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 RIBC1Q8N443 379 aaPredicted RBP19.04■□□□□ 0.64
PTN-201ENST00000348225 ARHGEF2Q92974 986 aaKnown RBP19.04■□□□□ 0.64
PTN-201ENST00000348225 PABPC5Q96DU9 382 aaKnown RBP19.04■□□□□ 0.64
PTN-201ENST00000348225 GORASP1Q9BQQ3 440 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 SLC46A2Q9BY10 475 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 PBX4Q9BYU1 374 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 HAUS2Q9NVX0 235 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 CFAP97Q9P2B7 532 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 DNMT3BQ9UBC3 853 aaKnown RBP19.04■□□□□ 0.64
PTN-201ENST00000348225 ZMYM5Q9UJ78 669 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 ARHGAP26Q9UNA1 814 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 HCFC2Q9Y5Z7 792 aa19.04■□□□□ 0.64
PTN-201ENST00000348225 ILVBLA1L0T0 632 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 J3KR12 359 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 PER2O15055 1255 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 PEX11BO96011 259 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 HLA-DQB2P05538 268 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ATP5DP30049 168 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 SSTR1P30872 391 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 AVPR1AP37288 418 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 ETFBP38117 255 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 CCR2P41597 374 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 SLCO1A2P46721 670 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 KLHL38Q2WGJ6 581 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 PPP2R2DQ66LE6 453 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 KCTD11Q693B1 232 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 NAPEPLDQ6IQ20 393 aa19.03■□□□□ 0.64
PTN-201ENST00000348225 KLHDC8BQ8IXV7 354 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms