RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PEX10O60683 326 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 OR1D2P34982 312 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 YWHAZP63104 245 aaKnown RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 KBTBD12Q3ZCT8 623 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SPDYCQ5MJ68 293 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ZCCHC8Q6NZY4 707 aaKnown RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FOXR2Q6PJQ5 311 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SLC26A11Q86WA9 606 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FAM105AQ9NUU6 356 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 UBP1Q9NZI7 540 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SHOC2Q9UQ13 582 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 C2orf71A6NGG8 1288 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ARVCFO00192 962 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 CCNE2O96020 404 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 MMP3P08254 477 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 HOXD13P35453 343 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 GPR1P46091 355 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 CRADDP78560 199 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 CNGA3Q16281 694 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 TSHZ1Q6ZSZ6 1077 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 NT5MQ9NPB1 228 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FANCFQ9NPI8 374 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 GULP1Q9UBP9 304 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 UBIAD1Q9Y5Z9 338 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 E9PBE3 544 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 KLHL41O60662 606 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 CDH2P19022 906 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 GLRA2P23416 452 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 BDNFP23560 247 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 TLX1P31314 330 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ABCG1P45844 678 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 NFIL3Q16649 462 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC8EQ6NSJ5 796 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 C16orf46Q6P387 395 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF572Q7Z3I7 529 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-202ENST00000346436 SCUBE1Q8IWY4 988 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 IL12RB2Q99665 862 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 PRDM16Q9HAZ2 1276 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 DZANK1Q9NVP4 752 aa11.07□□□□□ -0.64
CLCN6-202ENST00000346436 FAM237BA0A1B0GVD1 139 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 MICAL2O94851 1124 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TRIM16O95361 564 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 CHRNB2P17787 502 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ACAT1P24752 427 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 CDC16Q13042 620 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 KPNB1Q14974 876 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 EML3Q32P44 896 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC23Q53EV4 343 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 C6orf10Q5SRN2 563 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 CACHD1Q5VU97 1274 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NUP93Q8N1F7 819 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 QRFPRQ96P65 431 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF556Q9HAH1 456 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 GRHL1Q9NZI5 618 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF142P52746 1687 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ROBO1Q9Y6N7 1651 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 LTBP3Q9NS15 1303 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PTGIRP43119 386 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 DHPSP49366 369 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TUBP50607 506 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NDST1P52848 882 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 SMAD3P84022 425 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 MRPL46Q9H2W6 279 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ATP13A3Q9H7F0 1226 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PHPT1Q9NRX4 125 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 AP4E1Q9UPM8 1137 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 EIF3LQ9Y262 564 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 STXBP5LQ9Y2K9 1186 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TDRKHQ9Y2W6 561 aaKnown RBP11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D4O60343 1298 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 PLA2G6O60733 806 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ATP6V1B1P15313 513 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 BLKP51451 505 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ESRRGP62508 458 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NOMO3P69849 1222 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TRAPPC5Q8IUR0 188 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 RGS18Q9NS28 235 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 KCTD5Q9NXV2 234 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TSPAN16Q9UKR8 245 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 MYH10P35580 1976 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 MYH6P13533 1939 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 H3BMM5 538 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 GLP2RO95838 553 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 RBL1P28749 1068 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NUDT2P50583 147 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 SP2Q02086 613 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 IZUMO2Q6UXV1 221 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 ILDR2Q71H61 639 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
CLCN6-202ENST00000346436 TNIP2Q8NFZ5 429 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms