RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PTPN3P26045 913 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 NUDT2P50583 147 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 RPS24P62847 133 aaKnown RBP13.56□□□□□ -0.24
CASC4-202ENST00000345795 TUSC3Q13454 348 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 DEFB115Q30KQ5 88 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 RIBC1Q8N443 379 aaPredicted RBP13.56□□□□□ -0.24
CASC4-202ENST00000345795 OR7D4Q8NG98 312 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 DCAKDQ8WVC6 231 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 VPS39Q96JC1 886 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.56□□□□□ -0.24
CASC4-202ENST00000345795 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
CASC4-202ENST00000345795 PIRO00625 290 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 SEPT4O43236 478 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 TLR5O60602 858 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 USP1O94782 785 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PROCP04070 461 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 UBTFL6P0CB48 400 aaPredicted RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 ACRP10323 421 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 CHRM3P20309 590 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 NAPEPLDQ6IQ20 393 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 LPCAT1Q8NF37 534 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PYDC1Q8WXC3 89 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 HNRNPABQ99729 332 aaKnown RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 SEMA3CQ99985 751 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 WWP1Q9H0M0 922 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 NMUR1Q9HB89 426 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 FZD10Q9ULW2 581 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 H0Y626 953 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 YWHAQP27348 245 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PTPN7P35236 360 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PAPOLAP51003 745 aaKnown RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 GPAMQ9HCL2 828 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 RAMP2O60895 175 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 DDHD2O94830 711 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 CTPS1P17812 591 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 SLC8A1P32418 973 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 FDFT1P37268 417 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 ACLYP53396 1101 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 PSTKQ8IV42 348 aaKnown RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 OXNAD1Q96HP4 312 aaPredicted RBP13.55□□□□□ -0.24
CASC4-202ENST00000345795 CATSPERBQ9H7T0 1116 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 DSEQ9UL01 958 aa13.55□□□□□ -0.24
CASC4-202ENST00000345795 E5RI56 91 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 KRT36O76013 467 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 CHRNGP07510 517 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 ZCCHC18P0CG32 403 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 SEMA5AQ13591 1074 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 ITIH4Q14624 930 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 POLD3Q15054 466 aaPredicted RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 SPATA24Q86W54 205 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 GALNT4Q8N4A0 578 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 ZSCAN18Q8TBC5 510 aaPredicted RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 MTBPQ96DY7 904 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 NSL1Q96IY1 281 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 SLC39A8Q9C0K1 460 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 KDM4CQ9H3R0 1056 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 CNTN6Q9UQ52 1028 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 GUCA1CO95843 209 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 C2P06681 752 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 HDCP19113 662 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 CTGFP29279 349 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 AXLP30530 894 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 GP5P40197 560 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 LPIN1Q14693 890 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 GRM3Q14832 879 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PTPRRQ15256 657 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PLD6Q8N2A8 252 aaKnown RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 MBL2P11226 248 aaPredicted RBP13.54□□□□□ -0.24
CASC4-202ENST00000345795 ACAP1Q15027 740 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 TEX9Q8N6V9 391 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 NIPA2Q8N8Q9 360 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 FAM156AQ8NDB6 213 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 ACVR1CQ8NER5 493 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 HDAC10Q969S8 669 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 YIPF3Q9GZM5 350 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 ALG9Q9H6U8 611 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
CASC4-202ENST00000345795 PIGNO95427 931 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 INHAP05111 366 aa13.53□□□□□ -0.24
CASC4-202ENST00000345795 HOXD10P28358 340 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms