RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ATP13A4Q4VNC1 1196 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 FSCBQ5H9T9 825 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 KCNT1Q5JUK3 1230 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 BRMS1LQ5PSV4 323 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 FBXL22Q6P050 247 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 STRADAQ7RTN6 431 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■□□ 19.1
TPM4-202ENST00000344824 HSPH1Q92598 858 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 ARRDC1-AS1Q9H2J1 176 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 GPATCH2LQ9NWQ4 482 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 SNX12Q9UMY4 172 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 NUMA1Q14980 2115 aa14.17□□□□□ -0.14
TPM4-202ENST00000344824 A0A1B0GVM2 712 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CCDC66A2RUB6 948 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 TCAF2A6NFQ2 919 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 PSTPIP1O43586 416 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 KRT1P04264 644 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 PCK1P35558 622 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 P2RY2P41231 377 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 IRAK1P51617 712 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CREB5Q02930 508 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 EIF4EBP2Q13542 120 aaPredicted RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 AUHQ13825 339 aaKnown RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 ODF2Q5BJF6 829 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 PITRM1Q5JRX3 1037 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 TTC39BQ5VTQ0 682 aaPredicted RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 RNF219Q5W0B1 726 aaPredicted RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 ADIPOR2Q86V24 386 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CCDC185Q8N715 623 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 FIBINQ8TAL6 211 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CENPIQ92674 756 aaPredicted RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 ALG3Q92685 438 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 IGSF8Q969P0 613 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 NT5C3BQ969T7 300 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 OSBPL9Q96SU4 736 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 PRMT1Q99873 361 aaKnown RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 DUSP15Q9H1R2 295 aaPredicted RBP14.16□□□□□ -0.14
TPM4-202ENST00000344824 SMOC1Q9H4F8 434 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 CD93Q9NPY3 652 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 ARHGEF38Q9NXL2 777 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
TPM4-202ENST00000344824 PCDHA3Q9Y5H8 950 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 ADAMTS9Q9P2N4 1935 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 DMXL1Q9Y485 3027 aa14.16□□□□□ -0.14
TPM4-202ENST00000344824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 ZNF185O15231 689 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 TIMM44O43615 452 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 EPN2O95208 641 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 DLDP09622 509 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 CXCR3P49682 368 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 RWDD2BP57060 319 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 RPL6Q02878 288 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 BYSLQ13895 437 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 PLEKHG6Q3KR16 790 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 PAPD7Q5XG87 772 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 PMS2CLQ68D20 193 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 AADACL2Q6P093 401 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 LRRC31Q6UY01 552 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 CYP2U1Q7Z449 544 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 C14orf80Q86SX3 495 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 C11orf74Q86VG3 221 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 DEFB119Q8N690 84 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 PGAP3Q96FM1 320 aaPredicted RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 SNRNP25Q9BV90 132 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 PARD6AQ9NPB6 346 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 ANLNQ9NQW6 1124 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 KIAA1522Q9P206 1035 aaPredicted RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 SAR1BQ9Y6B6 198 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 CEP104O60308 925 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 ENDOD1O94919 500 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 KRT7P08729 469 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 RARAP10276 462 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 ACADMP11310 421 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 MPLP40238 635 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 CTSOP43234 321 aaPredicted RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 PEX5P50542 639 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 MTA1Q13330 715 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 PTPRNQ16849 979 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 DCAF12L1Q5VU92 463 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 RNF43Q68DV7 783 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 CYP4V2Q6ZWL3 525 aaPredicted RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 TFAP2DQ7Z6R9 452 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 APCDD1Q8J025 514 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 SIPA1Q96FS4 1042 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 MRGPRX1Q96LB2 322 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 NCAPGQ9BPX3 1015 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 MKRN2Q9H000 416 aaKnown RBP14.15□□□□□ -0.14
TPM4-202ENST00000344824 MUC3BQ9H195 1237 aa14.15□□□□□ -0.14
TPM4-202ENST00000344824 MTG2Q9H4K7 406 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms