RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ATXN3P54252 364 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-202ENST00000344726 HDAC4P56524 1084 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 CST6Q15828 149 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 TTC31Q49AM3 519 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-202ENST00000344726 FILIP1LQ4L180 1135 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 ACAD10Q6JQN1 1059 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 WDR59Q6PJI9 974 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 LAYNQ6UX15 382 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 LRRC31Q6UY01 552 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 STRADAQ7RTN6 431 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 AADATQ8N5Z0 425 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 SNX19Q92543 992 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 BIRC7Q96CA5 298 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 CAMK1GQ96NX5 476 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 SELENOOQ9BVL4 669 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 BTBD1Q9H0C5 482 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 TMEM51Q9NW97 253 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 VPS28Q9UK41 221 aa14.81□□□□□ -0.04
HMGN3-202ENST00000344726 A0A1B0GVT2 93 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 A0A1W2PP55 124 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FAM72CH0Y354 149 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 BCAT2O15382 392 aaPredicted RBP14.8□□□□□ -0.04
HMGN3-202ENST00000344726 ATP9BO43861 1147 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 MT-CO1P00395 513 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 SYPP08247 313 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 GPD1P21695 349 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 GLDCP23378 1020 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 ADRA1BP35368 520 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 PSMD8P48556 350 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 RPL7AP62424 266 aaKnown RBP14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FOXC1Q12948 553 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 PPP1R15BQ5SWA1 713 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FAM72AQ5TYM5 149 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 MANEALQ5VSG8 457 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FAM72DQ6L9T8 149 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 USP30Q70CQ3 517 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 SETD3Q86TU7 594 aaPredicted RBP14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FAM72BQ86X60 149 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 DNAAF5Q86Y56 855 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 MCOLN2Q8IZK6 566 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 SH2D3CQ8N5H7 860 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 CCDC185Q8N715 623 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FAM172AQ8WUF8 416 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 MUC3BQ9H195 1237 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 PCED1AQ9H1Q7 454 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 NEUROG2Q9H2A3 272 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 EBF2Q9HAK2 575 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 FBXL12Q9NXK8 326 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 VPS51Q9UID3 782 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 SLC25A13Q9UJS0 675 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 NEU3Q9UQ49 428 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 AKAP13Q12802 2813 aa14.8□□□□□ -0.04
HMGN3-202ENST00000344726 PLK4O00444 970 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 CCP110O43303 1012 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SH3BP5O60239 455 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 RNASEH1O60930 286 aaKnown RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 FSBPO95073 299 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SERPINC1P01008 464 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 CCDC172P0C7W6 258 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SRCP12931 536 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 RRM1P23921 792 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SLC8A1P32418 973 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 NNMTP40261 264 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 PBX1P40424 430 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 CSNK1EP49674 416 aaKnown RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 FANCCQ00597 558 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 OGDHQ02218 1023 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 DLG2Q15700 870 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 ACBD5Q5T8D3 534 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 DNAJC24Q6P3W2 148 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 Q6ZVU0 165 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 ZNF571Q7Z3V5 609 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 HDDC3Q8N4P3 179 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 OR7D4Q8NG98 312 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 MCEEQ96PE7 176 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 ZYG11BQ9C0D3 744 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SGK2Q9HBY8 427 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 TM9SF3Q9HD45 589 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 NDFIP2Q9NV92 336 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 AIPL1Q9NZN9 384 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 OR12D3Q9UGF7 316 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 HS3ST2Q9Y278 367 aa14.79□□□□□ -0.04
HMGN3-202ENST00000344726 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
HMGN3-202ENST00000344726 TMCO5BA8MYB1 307 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 K7ERQ8 282 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 SMAD6O43541 496 aaKnown RBP14.78□□□□□ -0.04
HMGN3-202ENST00000344726 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
HMGN3-202ENST00000344726 TNFAIP3P21580 790 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 OR1E1P30953 314 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 DRD3P35462 400 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 PRKCIP41743 596 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 GALCP54803 685 aa14.78□□□□□ -0.04
HMGN3-202ENST00000344726 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms