RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ALDH18A1P54886 795 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 CHI3L2Q15782 390 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 AGO3Q9H9G7 860 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 CCNB1P14635 433 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 KCNK10P57789 538 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 FAM187BQ17R55 369 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 KRT80Q6KB66 452 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 C12orf76Q8N812 135 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 MCOLN3Q8TDD5 553 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 LRRC39Q96DD0 335 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 NDOR1Q9UHB4 597 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 VPS51Q9UID3 782 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 HTR7P34969 479 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SHDQ96IW2 340 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SERAC1Q96JX3 654 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SAMD11Q96NU1 681 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 PAFAH2Q99487 392 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 MTO1Q9Y2Z2 717 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 KNL1Q8NG31 2342 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 LRRC8EQ6NSJ5 796 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 HIBCHQ6NVY1 386 aaPredicted RBP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 FUBP3Q96I24 572 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 YIPF1Q9Y548 306 aa16.68■□□□□ 0.26
SMARCA4-201ENST00000344626 C1RP00736 705 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 AMD1P17707 334 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 MGAT1P26572 445 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 CRABP2P29373 138 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 GP5P40197 560 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 RFWD3Q6PCD5 774 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 HIPK4Q8NE63 616 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 ZNF333Q96JL9 665 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 PRDM12Q9H4Q4 367 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 GID8Q9NWU2 228 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 CLNS1AP54105 237 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 IL22Q9GZX6 179 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 CAPN10Q9HC96 672 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 KIF17Q9P2E2 1029 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 NCF1BA6NI72 391 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 NCF1CA8MVU1 366 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 QSOX1O00391 747 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 RAD51BO15315 384 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 NCF1P14598 390 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 DPYSL3Q14195 570 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 ZIM3Q96PE6 472 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 CPNE1Q99829 537 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 DNAJC16Q9Y2G8 782 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 RAET1GQ6H3X3 334 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 BAP1Q92560 729 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 PCDHGC5Q9Y5F6 944 aa16.67■□□□□ 0.26
SMARCA4-201ENST00000344626 INPPL1O15357 1258 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PCID2Q5JVF3 399 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 OR14C36Q8NHC7 312 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 POLMQ9NP87 494 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 WDR27A2RRH5 827 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 IL10P22301 178 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 LMO2P25791 158 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 CD86P42081 329 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 LYPLAL1Q5VWZ2 237 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 SPACA7Q96KW9 195 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 CDC42EP4Q9H3Q1 356 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 TDRKHQ9Y2W6 561 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 H3BQ06 376 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PAGE1O75459 146 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PPP1R37O75864 691 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PIGRP01833 764 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 GPR1P46091 355 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 CSHL1Q14406 222 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 NPHS2Q9NP85 383 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 AHSPQ9NZD4 102 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 NUP188Q5SRE5 1749 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 SLC38A8A6NNN8 435 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 EVPLLA8MZ36 301 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 SH3RF2Q8TEC5 729 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PIH1D1Q9NWS0 290 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 STX18Q9P2W9 335 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 PCDHGC3Q9UN70 934 aa16.66■□□□□ 0.26
SMARCA4-201ENST00000344626 KPNA5O15131 536 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 NAA30Q147X3 362 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 CHST9Q7L1S5 443 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 MARCOQ9UEW3 520 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 FAM32AQ9Y421 112 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-201ENST00000344626 VAPBO95292 243 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms