RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 PHBP35232 272 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 MAXP61244 160 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 CDK16Q00536 496 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 STXBP5Q5T5C0 1151 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 ADGRD1Q6QNK2 874 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 ARL14EPQ8N8R7 260 aaPredicted RBP13.86□□□□□ -0.19
CDC42-202ENST00000344548 MGARPQ8TDB4 240 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 SLC22A17Q8WUG5 538 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 KLF6Q99612 283 aaPredicted RBP13.86□□□□□ -0.19
CDC42-202ENST00000344548 TCF25Q9BQ70 676 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 FERMT1Q9BQL6 677 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 RBM22Q9NW64 420 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■■ 34
CDC42-202ENST00000344548 TRHDEQ9UKU6 1024 aa13.86□□□□□ -0.19
CDC42-202ENST00000344548 ZFP37Q9Y6Q3 630 aaPredicted RBP13.86□□□□□ -0.19
CDC42-202ENST00000344548 H3BNC9 293 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 MTSS1O43312 755 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 TLL1O43897 1013 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SUN1O94901 812 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 MLNP12872 115 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 OR1E1P30953 314 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CYP4F8P98187 520 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CAMK1Q14012 370 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 NUGGCQ68CJ6 796 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CASC4Q6P4E1 433 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 KLHDC10Q6PID8 442 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 KDELC2Q7Z4H8 507 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 FCRL3Q96P31 734 aaPredicted RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 LRRC3Q9BY71 257 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 TRPC7Q9HCX4 862 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SLC24A2Q9UI40 661 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 AGO1Q9UL18 857 aaKnown RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 OBSL1O75147 1896 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SDR42E2A6NKP2 422 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 GREM1O60565 184 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 TSPAN3O60637 253 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 ATP2A2P16615 1042 aaKnown RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 IRS1P35568 1242 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 NDST2P52849 883 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 EPHB3P54753 998 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 ZNF33AQ06730 810 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 TTC16Q8NEE8 873 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SLC44A1Q8WWI5 657 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 PABPC5Q96DU9 382 aaKnown RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 STAMBPL1Q96FJ0 436 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 ZNF778Q96MU6 729 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CYTH2Q99418 400 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 VAT1Q99536 393 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 RAD9AQ99638 391 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 C12orf65Q9H3J6 166 aaKnown RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 ATXN3LQ9H3M9 355 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 GLOD4Q9HC38 313 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 KCNK9Q9NPC2 374 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
CDC42-202ENST00000344548 PCDHA11Q9Y5I1 949 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
CDC42-202ENST00000344548 CEP290O15078 2479 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 TSHRP16473 764 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 KRT15P19012 456 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 PRKCHP24723 683 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 HARS2P49590 506 aaKnown RBP13.84□□□□□ -0.19
CDC42-202ENST00000344548 COG7P83436 770 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 PLPP4Q5VZY2 271 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 TMC8Q8IU68 726 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 CTAGE3PQ8IX95 158 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 PGBD5Q8N414 524 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 ANKRD42Q8N9B4 389 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 ATP2A3Q93084 1043 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 HCFC1R1Q9NWW0 138 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 MOCS1Q9NZB8 636 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 REV3LO60673 3130 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 HMX2A2RU54 273 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 F5H5T6 163 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 MUSKO15146 869 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 ATP9BO43861 1147 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 C8AP07357 584 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 GLDCP23378 1020 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 GABRR2P28476 465 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 CTNNB1P35222 781 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 BMPR1AP36894 532 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 MSH2P43246 934 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 IFNAR2P48551 515 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 KPNA1P52294 538 aaPredicted RBP13.84□□□□□ -0.19
CDC42-202ENST00000344548 DMTNQ08495 405 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 NIPAL4Q0D2K0 466 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 POLD3Q15054 466 aaPredicted RBP13.84□□□□□ -0.19
CDC42-202ENST00000344548 KLHL38Q2WGJ6 581 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 KLHDC8BQ8IXV7 354 aa13.84□□□□□ -0.19
CDC42-202ENST00000344548 RIBC1Q8N443 379 aaPredicted RBP13.84□□□□□ -0.19
CDC42-202ENST00000344548 OR7D4Q8NG98 312 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms