RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TUBB3Q13509 450 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 PRPSAP1Q14558 356 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 OVOS1Q6IE37 1185 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 NAPRTQ6XQN6 538 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ARHGAP24Q8N264 748 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ATPAF2Q8N5M1 289 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 SLC25A41Q8N5S1 370 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 URGCPQ8TCY9 931 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ADAM2Q99965 735 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ACBD6Q9BR61 282 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 MAN1C1Q9NR34 630 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 PHGDHO43175 533 aaKnown RBP15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 PSMG1O95456 288 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 IDH3AP50213 366 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 INSCQ1MX18 579 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 PM20D1Q6GTS8 502 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 SHKBP1Q8TBC3 707 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 PPP1R36Q96LQ0 422 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ZIC5Q96T25 663 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 IL22Q9GZX6 179 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 BRD8Q9H0E9 1235 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 NDFIP2Q9NV92 336 aa15.17■□□□□ 0.02
VIPAS39-202ENST00000343765 ERI2A8K979 691 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 HSPA4LO95757 839 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 GRK2P25098 689 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 GRIK1P39086 918 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 GLRBP48167 497 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SLC25A3Q00325 362 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 MGAT3Q09327 533 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 CDH17Q12864 832 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 CRHR2Q13324 411 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 GRM3Q14832 879 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SDHAF4Q5VUM1 108 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 FAM171BQ6P995 826 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SCN4BQ8IWT1 228 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SCUBE1Q8IWY4 988 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 ZNF781Q8N8C0 355 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 ATXN3LQ9H3M9 355 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 ADAM28Q9UKQ2 775 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SOX13Q9UN79 622 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 WASF2Q9Y6W5 498 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 MANSC4A6NHS7 340 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SIN3BO75182 1162 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 PAGE1O75459 146 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 NPY2RP49146 381 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 SLC5A3P53794 718 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 PEX6Q13608 980 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 DBN1Q16643 649 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 CCDC153Q494R4 210 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 BTBD8Q5XKL5 378 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 NAPEPLDQ6IQ20 393 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 ULK2Q8IYT8 1036 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 ZSCAN18Q8TBC5 510 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 TRIB2Q92519 343 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 STOML1Q9UBI4 398 aa15.16■□□□□ 0.02
VIPAS39-202ENST00000343765 TBX10O75333 385 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 MAGEA12P43365 314 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 CDK18Q07002 472 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 ZNF460Q14592 562 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 CFAP157Q5JU67 520 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 RABGAP1LQ5R372 815 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 CD300LGQ6UXG3 332 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 NRG4Q8WWG1 115 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 IRGQQ8WZA9 623 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 CASP10Q92851 521 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 VAT1Q99536 393 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 FICDQ9BVA6 458 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 TASP1Q9H6P5 420 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 NMRAL1Q9HBL8 299 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 NMRK1Q9NWW6 199 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 MPP6Q9NZW5 540 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 PLA2G4CQ9UP65 541 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 NEU3Q9UQ49 428 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 G3V2L1 256 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 TK2O00142 265 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 IRAK2O43187 625 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 PMPCBO75439 489 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 CCR10P46092 362 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 NUMBP49757 651 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 TSPY1Q01534 308 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 SNX30Q5VWJ9 437 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 RIPOR1Q6ZS17 1223 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 SPATA2LQ8IUW3 424 aaPredicted RBP15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 SPNS2Q8IVW8 549 aa15.15■□□□□ 0.02
VIPAS39-202ENST00000343765 ARHGAP12Q8IWW6 846 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms