RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 COL26A1Q96A83 441 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 MED15Q96RN5 788 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 CENPKQ9BS16 269 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SYNCQ9H7C4 482 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 MBD1Q9UIS9 605 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 DCTN4Q9UJW0 460 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 RPL26L1Q9UNX3 145 aaKnown RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NUP210LQ5VU65 1888 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 AP1G1O43747 822 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 GREM1O60565 184 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SERPINB7O75635 380 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 CTDNEP1O95476 244 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 ERBB2P04626 1255 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 S100A1P23297 94 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NTSR1P30989 418 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 CARSP49589 748 aaKnown RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TNK2Q07912 1038 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 KRT79Q5XKE5 535 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 MAP7D3Q8IWC1 876 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TSTD1Q8NFU3 115 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 CPLX3Q8WVH0 158 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 HPS3Q969F9 1004 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 LMLNQ96KR4 655 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NLRP4Q96MN2 994 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 OLFM3Q96PB7 478 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 BMP2KQ9NSY1 1161 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 DDX43Q9NXZ2 648 aaKnown RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SNTG2Q9NY99 539 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SAMD15Q9P1V8 674 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NFU1Q9UMS0 254 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 IGHV1OR15-9A0A0B4J2B8 117 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 PVALEFA0A1B0GWK0 134 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TSPAN3O60637 253 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 GSTT2P0CG29 244 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 GSTT2BP0CG30 244 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NFKBIAP25963 317 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 HNF1BP35680 557 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TMEM132DQ14C87 1099 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TEAD2Q15562 447 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 MUM1Q2TAK8 710 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 CCDC122Q5T0U0 273 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 RAB11FIP4Q86YS3 637 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SLC34A3Q8N130 599 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NAT14Q8WUY8 206 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 TLCD1Q96CP7 247 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 ACCSQ96QU6 501 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 HINFPQ9BQA5 517 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 NMRK1Q9NWW6 199 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 STK38LQ9Y2H1 464 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 HEY1Q9Y5J3 304 aa7.53□□□□□ -1.2
ZNF540-202ENST00000343599 ESYT3A0FGR9 886 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 TTLL13PA6NNM8 815 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 O00370 1275 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CCL16O15467 120 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 IGLV3-27P01718 113 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ATF6P18850 670 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 HTR7P34969 479 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 EMP3P54852 163 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 MORC3Q14149 939 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF568Q3ZCX4 644 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 RAB41Q5JT25 222 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 WASHC2DQ5SRD0 308 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CDKAL1Q5VV42 579 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 C8orf74Q6P047 294 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 TTC30AQ86WT1 665 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 KSR1Q8IVT5 923 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 C12orf76Q8N812 135 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 VPS37AQ8NEZ2 397 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 LPPQ93052 612 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 GFM2Q969S9 779 aaKnown RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 UTP4Q969X6 686 aaKnown RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 KLF16Q9BXK1 252 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CDH19Q9H159 772 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 DPH5Q9H2P9 285 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 EPB41L1Q9H4G0 881 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 DKK3Q9UBP4 350 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CARD8Q9Y2G2 431 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 KRT86O43790 486 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 GLI1P08151 1106 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 PYGMP11217 842 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 P4HA1P13674 534 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 IDEP14735 1019 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 ENDOUP21128 410 aaKnown RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 HSD17B3P37058 310 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 VHLP40337 213 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CCR2P41597 374 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 CTSKP43235 329 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 GFPT1Q06210 699 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-202ENST00000343599 RCN2Q14257 317 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 PTPRNQ16849 979 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 HSP90AA4PQ58FG1 418 aa7.52□□□□□ -1.21
ZNF540-202ENST00000343599 GPR158Q5T848 1215 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms