RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 EGFLAMQ63HQ2 1017 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 SEL1L3Q68CR1 1132 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 TTC33Q6PID6 262 aaPredicted RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 CHSY3Q70JA7 882 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 DCPSQ96C86 337 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 BCAP29Q9UHQ4 241 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 FEM1BQ9UK73 627 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 GJA3Q9Y6H8 435 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 ADGRA2Q96PE1 1338 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 USP12O75317 370 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 EIF2B2P49770 351 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 NAGLUP54802 743 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 ENPEPQ07075 957 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 SLFN12LQ6IEE8 588 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 DLG3Q92796 817 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 ATP6V0A1Q93050 837 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 FCRL3Q96P31 734 aaPredicted RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 LGMNQ99538 433 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 XYLT2Q9H1B5 865 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 HIPK3Q9H422 1215 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 COPG1Q9Y678 874 aaKnown RBP15.52■□□□□ 0.08
SNX18-202ENST00000343017 SQORQ9Y6N5 450 aa15.52■□□□□ 0.08
SNX18-202ENST00000343017 A0A096LPK6 155 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 ZNF839A8K0R7 811 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 HDAC3O15379 428 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 ALDH1A2O94788 518 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 LDHAP00338 332 aaKnown RBP15.52■□□□□ 0.07
SNX18-202ENST00000343017 ZNF182P17025 639 aaPredicted RBP15.52■□□□□ 0.07
SNX18-202ENST00000343017 YAP1P46937 504 aaKnown RBP15.52■□□□□ 0.07
SNX18-202ENST00000343017 PSME3P61289 254 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 FSTL1Q12841 308 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 ZNF829Q3KNS6 432 aaPredicted RBP15.52■□□□□ 0.07
SNX18-202ENST00000343017 FAM160B2Q86V87 743 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 NIM1KQ8IY84 436 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 BORCS5Q969J3 196 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 MCRS1Q96EZ8 462 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 CNPY3Q9BT09 278 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 SLC8A2Q9UPR5 921 aa15.52■□□□□ 0.07
SNX18-202ENST00000343017 COL11A2P13942 1736 aaPredicted RBP15.52■□□□□ 0.07
SNX18-202ENST00000343017 CCDC78A2IDD5 438 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 C2CD4BA6NLJ0 364 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 TPST1O60507 370 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 E2F6O75461 281 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 BMP10O95393 424 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 GJA8P48165 433 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 ITGADQ13349 1161 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 DUOXA2Q1HG44 320 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 CCDC14Q49A88 953 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 NHSL2Q5HYW2 709 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 FAM183BPQ6ZVS7 135 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SLC7A5P1Q8MH63 180 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SLC39A3Q9BRY0 314 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 MCF2P10911 925 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 CCDC130P13994 396 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 IDO1P14902 403 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 CYP2F1P24903 491 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 GRIA4P48058 902 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 RPL14P50914 215 aaKnown RBP15.51■□□□□ 0.07
SNX18-202ENST00000343017 CLCN2P51788 898 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 TRIM25Q14258 630 aaKnown RBP15.51■□□□□ 0.07
SNX18-202ENST00000343017 FSTL4Q6MZW2 842 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 STRA8Q7Z7C7 330 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 OFCC1Q8IZS5 231 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SPATA6LQ8N4H0 392 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SLC15A4Q8N697 577 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 CNDP1Q96KN2 507 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 MUC3BQ9H195 1237 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SOX17Q9H6I2 414 aaPredicted RBP15.51■□□□□ 0.07
SNX18-202ENST00000343017 VPS45Q9NRW7 570 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 SMOXQ9NWM0 555 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 ZNF70Q9UC06 446 aaPredicted RBP15.51■□□□□ 0.07
SNX18-202ENST00000343017 VPS28Q9UK41 221 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 PCDHGA7Q9Y5G6 932 aa15.51■□□□□ 0.07
SNX18-202ENST00000343017 PRORSD1PA6NEY8 169 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 TRIM38O00635 465 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 PRKCQQ04759 706 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 TRAF2Q12933 501 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 LDLRAP1Q5SW96 308 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 MAMDC4Q6UXC1 1216 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 BRSK2Q8IWQ3 736 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 NPLQ9BXD5 320 aaPredicted RBP15.5■□□□□ 0.07
SNX18-202ENST00000343017 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 ZBTB26Q9HCK0 441 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 SEPT10Q9P0V9 454 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 CNOT11Q9UKZ1 510 aaKnown RBP15.5■□□□□ 0.07
SNX18-202ENST00000343017 PTPRFP10586 1907 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 AKAP10O43572 662 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 CDH3P22223 829 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 ACTR2P61160 394 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 TUBA4AP68366 448 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 BAATQ14032 418 aaPredicted RBP15.5■□□□□ 0.07
SNX18-202ENST00000343017 NEDD8Q15843 81 aa15.5■□□□□ 0.07
SNX18-202ENST00000343017 GLRA4Q5JXX5 417 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms