RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 DUOXA1Q1HG43 343 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CLEC16AQ2KHT3 1053 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ZNF284Q2VY69 593 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.3□□□□□ -1.72
BPTF-204ENST00000342579 WDR59Q6PJI9 974 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CD300LGQ6UXG3 332 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MTERF4Q7Z6M4 381 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 TRIM48Q8IWZ4 208 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CPXM2Q8N436 756 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 TMEM105Q8N8V8 129 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 N4BP2L2Q92802 583 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 CENPTQ96BT3 561 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 KLHDC7BQ96G42 594 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CFAP57Q96MR6 1250 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CPXM1Q96SM3 734 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 FAM83CQ9BQN1 747 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 REPIN1Q9BWE0 567 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 SLC4A5Q9BY07 1137 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CSNK1G1Q9HCP0 422 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 UVRAGQ9P2Y5 699 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 FAM186AA6NE01 2351 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CENPFP49454 3210 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 A0A1B0GTW7 788 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 TARSL2A2RTX5 802 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 CACNB4O00305 520 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 MCF2LO15068 1137 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 POP4O95707 220 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 ERBB2P04626 1255 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ADRA1BP35368 520 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MPLP40238 635 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 DUSP3P51452 185 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 GNA12Q03113 381 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 AP1B1Q10567 949 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ACOX1Q15067 660 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CCDC14Q49A88 953 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MS4A13Q5J8X5 152 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 PITRM1Q5JRX3 1037 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ERMARDQ5T6L9 678 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MARC1Q5VT66 337 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 FOXR1Q6PIV2 292 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 Q6ZS52 159 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 STRADAQ7RTN6 431 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 PTAR1Q7Z6K3 402 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 TMEM110Q86TL2 294 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SETD3Q86TU7 594 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 GAB3Q8WWW8 586 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 VMP1Q96GC9 406 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 TOE1Q96GM8 510 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 RBM41Q96IZ5 413 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 SERAC1Q96JX3 654 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 FSD1LQ9BXM9 530 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MAGEH1Q9H213 219 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ATP13A3Q9H7F0 1226 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ACP6Q9NPH0 428 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 TRMT1Q9NXH9 659 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 MPP6Q9NZW5 540 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 GUCA1BQ9UMX6 200 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ITM2BQ9Y287 266 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 GOLGA6L7A0A1B0GV03 622 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SIGLEC16A6NMB1 481 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ESPNB1AK53 854 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 TEX33O43247 280 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 HOXC11O43248 304 aaPredicted RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 PI15O43692 258 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 IFNB1P01574 187 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SRPRAP08240 638 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 RHOQP17081 205 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 MAPKAPK2P49137 400 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 AIF1P55008 147 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SARNPP82979 210 aaKnown RBP4.3□□□□□ -1.72
BPTF-204ENST00000342579 PTPN20Q4JDL3 420 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 FAXCQ5TGI0 409 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SMYD5Q6GMV2 418 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SYT12Q8IV01 421 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 PIP4K2CQ8TBX8 421 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 EPS8L1Q8TE68 723 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SLC20A1Q8WUM9 679 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 P3H4Q92791 437 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 GPR63Q9BZJ6 419 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SLC7A5P2Q9GIP4 190 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 PPCSQ9HAB8 311 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 SGK2Q9HBY8 427 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 IRAK4Q9NWZ3 460 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 GULP1Q9UBP9 304 aa4.3□□□□□ -1.72
BPTF-204ENST00000342579 CITO14578 2027 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 KNL1Q8NG31 2342 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 A0A1W2PQ67 120 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 E9PAM4 449 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 APOL1O14791 398 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 CACNG3O60359 315 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 ANXA6P08133 673 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 CCDC175P0C221 793 aa4.29□□□□□ -1.72
BPTF-204ENST00000342579 LINC00271P0C7V0 271 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms