RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TRPM5Q9NZQ8 1165 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 BFARQ9NZS9 450 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 SAMD15Q9P1V8 674 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 ZNF212Q9UDV6 495 aa20.4■□□□□ 0.86
RTN1-202ENST00000342503 CARNS1A5YM72 827 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 COCHO43405 550 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 ASMTLO95671 621 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 MTA1Q13330 715 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 TAF12Q16514 161 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 ANO4Q32M45 955 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 BANPQ8N9N5 519 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 TTC17Q96AE7 1141 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 MAGEB18Q96M61 343 aa20.39■□□□□ 0.86
RTN1-202ENST00000342503 AAR2Q9Y312 384 aaKnown RBP20.39■□□□□ 0.86
RTN1-202ENST00000342503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
RTN1-202ENST00000342503 TCP11X1B4DZS4 312 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 TRIM49D1C9J1S8 452 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 PRRG1O14668 218 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 ACSL4O60488 711 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 KRT37O76014 449 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 PEX11BO96011 259 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 POLBP06746 335 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 SNRPAP09012 282 aaKnown RBP20.39■□□□□ 0.85
RTN1-202ENST00000342503 NPY2RP49146 381 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 LBX1P52954 281 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 IL9RQ01113 521 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 NIPAL4Q0D2K0 466 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 TWF1Q12792 350 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 SLC1A5Q15758 541 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 SPANXN3Q5MJ09 141 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 CERCAMQ5T4B2 595 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 NAPEPLDQ6IQ20 393 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 KLHDC10Q6PID8 442 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 CES3Q6UWW8 571 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 LGI2Q8N0V4 545 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 DNAJC5GQ8N7S2 189 aa20.39■□□□□ 0.85
RTN1-202ENST00000342503 ALKBH8Q96BT7 664 aaKnown RBP20.39■□□□□ 0.85
RTN1-202ENST00000342503 TRMT2BQ96GJ1 504 aaKnown RBP20.39■□□□□ 0.85
RTN1-202ENST00000342503 MRPL17Q9NRX2 175 aaKnown RBP20.39■□□□□ 0.85
RTN1-202ENST00000342503 F5H5T6 163 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 J3KR12 359 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 ANXA9O76027 345 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 MT-CYBP00156 380 aaPredicted RBP20.38■□□□□ 0.85
RTN1-202ENST00000342503 SLC6A4P31645 630 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 ELF1P32519 619 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 VEPH1Q14D04 833 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 LGSNQ5TDP6 509 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 MARK2Q7KZI7 788 aaKnown RBP20.38■□□□□ 0.85
RTN1-202ENST00000342503 C16orf59Q7L2K0 433 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 FCRL3Q96P31 734 aaPredicted RBP20.38■□□□□ 0.85
RTN1-202ENST00000342503 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 RPS6KL1Q9Y6S9 549 aa20.38■□□□□ 0.85
RTN1-202ENST00000342503 PLXNA4Q9HCM2 1894 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 NEBLO76041 1014 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 ZWINTO95229 277 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 TPH1P17752 444 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 FOXN2P32314 431 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 PPM1AP35813 382 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 SLC18A2Q05940 514 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 CDH17Q12864 832 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 BMPR2Q13873 1038 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 SH2D5Q6ZV89 423 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 LINC00523Q86TU6 105 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 TCEAL8Q8IYN2 117 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 FATE1Q969F0 183 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 ZNF669Q96BR6 464 aaPredicted RBP20.37■□□□□ 0.85
RTN1-202ENST00000342503 SEC16BQ96JE7 1060 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 TGS1Q96RS0 853 aaKnown RBP20.37■□□□□ 0.85
RTN1-202ENST00000342503 TBL1YQ9BQ87 522 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 SP110Q9HB58 689 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 SLC17A6Q9P2U8 582 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 GRID1Q9ULK0 1009 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 PCDHB12Q9Y5F1 795 aa20.37■□□□□ 0.85
RTN1-202ENST00000342503 TEX28O15482 410 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 ATP9BO43861 1147 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 KRT38O76015 456 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 PYGBP11216 843 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 MAPKAPK2P49137 400 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 HARS2P49590 506 aaKnown RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 SERPINB9P50453 376 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 GEMP55040 296 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 POLD3Q15054 466 aaPredicted RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 C5orf22Q49AR2 442 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 FAM133BQ5BKY9 247 aaKnown RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 RFWD3Q6PCD5 774 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 DNAJB7Q7Z6W7 309 aaPredicted RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 ZNF354CQ86Y25 554 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 CFAP52Q8N1V2 620 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 IPMKQ8NFU5 416 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 TCP10LQ8TDR4 215 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 CDKL2Q92772 493 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 PLD4Q96BZ4 506 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 PPP1R2P1Q96PQ5 205 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 RNF38Q9H0F5 515 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 INSL5Q9Y5Q6 135 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 OBSL1O75147 1896 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 MYLKQ15746 1914 aa20.36■□□□□ 0.85
RTN1-202ENST00000342503 KIAA0100Q14667 2235 aaKnown RBP20.36■□□□□ 0.85
RTN1-202ENST00000342503 AP3B1O00203 1094 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms