RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ADPRHL2Q9NX46 363 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 GNPTGQ9UJJ9 305 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 TNPO3Q9Y5L0 923 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 VPS4BO75351 444 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 CAPSQ13938 189 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 IL27RAQ6UWB1 636 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 TMEM132CQ8N3T6 1108 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 SEPHS2Q99611 448 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 ACO2Q99798 780 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 RAD21L1Q9H4I0 556 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 POMKQ9H5K3 350 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 DDX3XO00571 662 aaKnown RBP eCLIP15.23■□□□□ 0.031e-7■■■□□ 18.1
UBE3B-202ENST00000342494 ZNHIT3Q15649 155 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 CASP12Q6UXS9 341 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 ZNF621Q6ZSS3 439 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 NYAP1Q6ZVC0 841 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 CERS5Q8N5B7 392 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 MTFMTQ96DP5 389 aaKnown RBP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 CLIP3Q96DZ5 547 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 SEMA4AQ9H3S1 761 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 TLE6Q9H808 572 aa15.23■□□□□ 0.03
UBE3B-202ENST00000342494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE3B-202ENST00000342494 A0A087X1B8 175 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 HSMCR30P0CW71 290 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ELNP15502 786 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PAICSP22234 425 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 KDELR1P24390 212 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 S100A3P33764 101 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ABL2P42684 1182 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 COPZ1P61923 177 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 BIKQ13323 160 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 TARBP2Q15633 366 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 TBCELQ5QJ74 424 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 TMEM26Q6ZUK4 368 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ATL1Q8WXF7 558 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 USP6NLQ92738 828 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 N6AMT1Q9Y5N5 214 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ACSL4O60488 711 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 HNRNPCP07910 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PSMC3P17980 439 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 C21orf59P57076 290 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ITIH4Q14624 930 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PCID2Q5JVF3 399 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 SDHAF4Q5VUM1 108 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 FAM183BPQ6ZVS7 135 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PSTKQ8IV42 348 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 KYQ8NBH2 561 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ASB2Q96Q27 587 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 AGXT2Q9BYV1 514 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 GEMIN8Q9NWZ8 242 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 A0A0B4J269 797 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 KPNA5O15131 536 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 RARAP10276 462 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 VAV1P15498 845 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 CDC25CP30307 473 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 NUP107P57740 925 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 IRX1P78414 480 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 NAB1Q13506 487 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 FASTKQ14296 549 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 WDR93Q6P2C0 686 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PRMT9Q6P2P2 845 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 SRLQ86TD4 932 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 VWDEQ8N2E2 1590 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PROX1Q92786 737 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 BRD9Q9H8M2 597 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 IL1RAPL1Q9NZN1 696 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ADH1CP00326 375 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 COX7A2P14406 83 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 NFKB1P19838 968 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 TRIT1Q9H3H1 467 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 CROTQ9UKG9 612 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 C2CD2Q9Y426 696 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 CHURC1-FNTBB4DL54 471 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 BUD23O43709 281 aaKnown RBP15.22■□□□□ 0.03
UBE3B-202ENST00000342494 GABRR2P28476 465 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 EPHX4Q8IUS5 362 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 PCDHAC2Q9Y5I4 1007 aa15.22■□□□□ 0.03
UBE3B-202ENST00000342494 ARHGAP23Q9P227 1491 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 SPATA31C2B4DYI2 1134 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 SERPINB1P30740 379 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 DLG4P78352 724 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 PPP3CAQ08209 521 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 DPYSL3Q14195 570 aa15.21■□□□□ 0.03
UBE3B-202ENST00000342494 DDR2Q16832 855 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms