RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 PEBP4Q96S96 227 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 PSAT1Q9Y617 370 aa12.64□□□□□ -0.39
SNRNP48-201ENST00000342415 HOXC6P09630 235 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CPB1P15086 417 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 LRPAP1P30533 357 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 PSME3P61289 254 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC25A11Q02978 314 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 LBRQ14739 615 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 MAP1SQ66K74 1059 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TLDC1Q6P9B6 456 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 OTOP3Q7RTS5 596 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 SPATA22Q8NHS9 363 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 RPRD1AQ96P16 312 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 APOL5Q9BWW9 433 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CACNG4Q9UBN1 327 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 NFASCO94856 1347 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 C1orf232A0A0U1RR37 186 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 NEMP2A6NFY4 417 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 BIRC5O15392 142 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CLOCKO15516 846 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 PLA2G6O60733 806 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 MPOP05164 745 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 BDNFP23560 247 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 DAB2P98082 770 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 IRF9Q00978 393 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CYP51A1Q16850 503 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 FSTL4Q6MZW2 842 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 FRMD7Q6ZUT3 714 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TSPAN14Q8NG11 270 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 ERLEC1Q96DZ1 483 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TSPAN17Q96FV3 270 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 LATS2Q9NRM7 1088 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 DTLQ9NZJ0 730 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 LNPEPQ9UIQ6 1025 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 ZNF229Q9UJW7 825 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TEX264Q9Y6I9 313 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 ZBTB24O43167 697 aaPredicted RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 B4GALT4O60513 344 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TIPRLO75663 272 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TFEBP19484 476 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 LMO2P25791 158 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 HMOX2P30519 316 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 ZNF252P-AS1Q0IIN9 211 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 TWF1Q12792 350 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 FASTKD5Q7L8L6 764 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 FNIP1Q8TF40 1166 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 WNT8BQ93098 351 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 CDH19Q9H159 772 aa12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 NOL11Q9H8H0 719 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
SNRNP48-201ENST00000342415 PTGES3LE9PB15 166 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 ATP6V1B2P21281 511 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 CCR10P46092 362 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 CDK7P50613 346 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 PRAMEF19Q5SWL8 479 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 KIAA1841Q6NSI8 718 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 NEPROQ6NW34 567 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 PARP8Q8N3A8 854 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 DCBLD1Q8N8Z6 715 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 CHD4Q14839 1912 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 KCNU1A8MYU2 1149 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 F8W8V4 182 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 PMM2O15305 246 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 SORBS2O94875 1100 aaKnown RBP12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 OR6B1O95007 311 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 LTFP02788 710 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 PCNAP12004 261 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 RGS2P41220 211 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GTF2H3Q13889 308 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GRM3Q14832 879 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GALNT15Q8N3T1 639 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 MAGEE2Q8TD90 523 aaPredicted RBP12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 APBB2Q92870 758 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 PCDHAC1Q9H158 963 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GID8Q9NWU2 228 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
SNRNP48-201ENST00000342415 GALNT8Q9NY28 637 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms