RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 YIPF4Q9BSR8 244 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 SPATA9Q9BWV2 254 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 OSBPL6Q9BZF3 934 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 CYP4F12Q9HCS2 524 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 CD274Q9NZQ7 290 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 PCDHB15Q9Y5E8 787 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 MAP2K7O14733 419 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 C1RP00736 705 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 FTH1P02794 183 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 IL9P15248 144 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 GNG11P61952 73 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 MRPS22P82650 360 aaKnown RBP8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ACY1Q03154 408 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 FAAP100Q0VG06 881 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 SLMAPQ14BN4 828 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 BOLA3Q53S33 107 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 MORN1Q5T089 497 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 C19orf48Q6RUI8 117 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ATG14Q6ZNE5 492 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 OTOAQ7RTW8 1153 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 EFL1Q7Z2Z2 1120 aaKnown RBP8.57□□□□□ -1.04
HMGB1-203ENST00000341423 CROCCP2Q86T23 111 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 FGF13Q92913 245 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 LRIG1Q96JA1 1093 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ULBP1Q9BZM6 244 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 RNF121Q9H920 327 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 DNAI1Q9UI46 699 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 A0A096LPK6 155 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
HMGB1-203ENST00000341423 MAP3K21Q5TCX8 1036 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ZNF366Q8N895 744 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 DLG3Q92796 817 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 SDCCAG3Q96C92 435 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
HMGB1-203ENST00000341423 ZMYND12Q9H0C1 365 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 KCNH6Q9H252 994 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 SPHK2Q9NRA0 654 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 IL1RAPL1Q9NZN1 696 aa8.57□□□□□ -1.04
HMGB1-203ENST00000341423 KLRG2A4D1S0 409 aaPredicted RBP8.56□□□□□ -1.04
HMGB1-203ENST00000341423 FANCGO15287 622 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TRIM49P0CI25 452 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TRIM49CP0CI26 452 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CCDC6Q16204 474 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CEP85LQ5SZL2 805 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 GPR153Q6NV75 609 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 STK32CQ86UX6 486 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 LRRC52Q8N7C0 313 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 PTGFRNQ9P2B2 879 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ANKRD6Q9Y2G4 727 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CDC14CA4D256 554 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ANKDD1BA6NHY2 528 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 KRT37O76014 449 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CDK14O94921 469 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 COX6B1P14854 86 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 MYOGP15173 224 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ITGB8P26012 769 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 VAV2P52735 878 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 MMEL1Q495T6 779 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 LCTLQ6UWM7 567 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 C15orf39Q6ZRI6 1047 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 UBE2E3Q969T4 207 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ZPBPQ9BS86 351 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TM7SF3Q9NS93 570 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ENTPD4Q9Y227 616 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 DERAQ9Y315 318 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 FIS1Q9Y3D6 152 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 RIPK3Q9Y572 518 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CNTRLQ7Z7A1 2325 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ENTPD5O75356 428 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 HNF1AP20823 631 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 CHRNB4P30926 498 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
HMGB1-203ENST00000341423 RASGRP2Q7LDG7 609 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 SRLQ86TD4 932 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 P3H2Q8IVL5 708 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 BRSK2Q8IWQ3 736 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 EEF2KMTQ96G04 330 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 INTS13Q9NVM9 706 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 PCDHGA2Q9Y5H1 932 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 SMIM28A0A1B0GU29 152 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TXNDC9O14530 226 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 MT-ND5P03915 603 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 THEGLP0DJG4 465 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 KCNA3P22001 575 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 GPD2P43304 727 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 COPZ1P61923 177 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 FOXD4Q12950 439 aaPredicted RBP8.56□□□□□ -1.04
HMGB1-203ENST00000341423 C20orf194Q5TEA3 1177 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 ZDHHC20Q5W0Z9 365 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TXNDC8Q6A555 127 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 SLC22A18Q96BI1 424 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 AP2M1Q96CW1 435 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 REEP2Q9BRK0 252 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 GPAMQ9HCL2 828 aa8.56□□□□□ -1.04
HMGB1-203ENST00000341423 AAR2Q9Y312 384 aaKnown RBP8.56□□□□□ -1.04
HMGB1-203ENST00000341423 TRGV8A0A0C4DH27 118 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms