RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 STRA8Q7Z7C7 330 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 USP33Q8TEY7 942 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 SCG3Q8WXD2 468 aaKnown RBP20.52■□□□□ 0.88
SPG7-202ENST00000341316 FAM136AQ96C01 138 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 MMADHCQ9H3L0 296 aaPredicted RBP20.52■□□□□ 0.88
SPG7-202ENST00000341316 SPC25Q9HBM1 224 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 SNX15Q9NRS6 342 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 DCDC2Q9UHG0 476 aa20.52■□□□□ 0.88
SPG7-202ENST00000341316 CAPN14A8MX76 684 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 SEPT4O43236 478 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 ARRB2P32121 409 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 CAP1Q01518 475 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 HSP90AA5PQ58FG0 334 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 GRTP1Q5TC63 336 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 FAM91A1Q658Y4 838 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 LRRC74BQ6ZQY2 392 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 C10orf107Q8IVU9 208 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 STMN2Q93045 179 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 RBBP8Q99708 897 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 PPARGC1AQ9UBK2 798 aaKnown RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 FAM155AB1AL88 458 aaPredicted RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 MTSS1O43312 755 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 MSI1O43347 362 aaKnown RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 B4GALT3O60512 393 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 USP1O94782 785 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 PGM1P36871 562 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 RAB27AP51159 221 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 IRX1P78414 480 aaPredicted RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 CACNB2Q08289 660 aaPredicted RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 TUSC3Q13454 348 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 TMEM154Q6P9G4 183 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 PLD6Q8N2A8 252 aaKnown RBP20.51■□□□□ 0.87
SPG7-202ENST00000341316 ACVR1CQ8NER5 493 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 PPP1R14CQ8TAE6 165 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 UCMAQ8WVF2 138 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 OSBPL2Q9H1P3 480 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 SFMBT1Q9UHJ3 866 aa20.51■□□□□ 0.87
SPG7-202ENST00000341316 CCND3P30281 292 aaPredicted RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 MAGEA12P43365 314 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 THOC5Q13769 683 aaKnown RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 ITPRIPL1Q6GPH6 555 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 FSTL4Q6MZW2 842 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 ARHGAP12Q8IWW6 846 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 SCML4Q8N228 414 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 SPATA22Q8NHS9 363 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 FBXO27Q8NI29 283 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 ATP2A3Q93084 1043 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 WWP1Q9H0M0 922 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 CAB39LQ9H9S4 337 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 ARHGEF38Q9NXL2 777 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 NUDT5Q9UKK9 219 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 SHROOM3Q8TF72 1996 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 ENO4A6NNW6 628 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 ERI2A8K979 691 aaKnown RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 B2RBV5 119 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 GOLGA8TH3BQL2 631 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 IRAK2O43187 625 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 ENO1P06733 434 aaKnown RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 OR4Q2P0C623 313 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 SLC1A6P48664 564 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 INHBEP58166 350 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 NKX3-2P78367 333 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 DLG2Q15700 870 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 VAT1Q99536 393 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 STX18Q9P2W9 335 aaKnown RBP20.5■□□□□ 0.87
SPG7-202ENST00000341316 DNAJC16Q9Y2G8 782 aa20.5■□□□□ 0.87
SPG7-202ENST00000341316 CCDC78A2IDD5 438 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 DFFAO00273 331 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 CHRM1P11229 460 aaPredicted RBP20.49■□□□□ 0.87
SPG7-202ENST00000341316 NMBRP28336 390 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 ZNF135P52742 658 aaPredicted RBP20.49■□□□□ 0.87
SPG7-202ENST00000341316 LIMK2P53671 638 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 SLC5A3P53794 718 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 RCN2Q14257 317 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 CCSAPQ6IQ19 270 aaPredicted RBP20.49■□□□□ 0.87
SPG7-202ENST00000341316 IRGCQ6NXR0 463 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 CASP10Q92851 521 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 ISL2Q96A47 359 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 NDFIP2Q9NV92 336 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 LRCH1Q9Y2L9 728 aa20.49■□□□□ 0.87
SPG7-202ENST00000341316 TNFRSF10BO14763 440 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 ZNF189O75820 626 aaPredicted RBP20.48■□□□□ 0.87
SPG7-202ENST00000341316 MXRA7P84157 204 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 IRF9Q00978 393 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 PRKCZQ05513 592 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 CDK18Q07002 472 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 LBRQ14739 615 aaKnown RBP20.48■□□□□ 0.87
SPG7-202ENST00000341316 DBN1Q16643 649 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 SCD5Q86SK9 330 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 SUSD3Q96L08 255 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 COPG2Q9UBF2 871 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 DSEQ9UL01 958 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.48■□□□□ 0.87
SPG7-202ENST00000341316 WASF2Q9Y6W5 498 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.48■□□□□ 0.87
SPG7-202ENST00000341316 PAGE1O75459 146 aa20.48■□□□□ 0.87
SPG7-202ENST00000341316 ALDH18A1P54886 795 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms