RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SDC4P31431 198 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 MRPS5P82675 430 aaKnown RBP15.42■□□□□ 0.06
BRAT1-201ENST00000340611 NME3Q13232 169 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 PDE1CQ14123 709 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-201ENST00000340611 B3GNT6Q6ZMB0 384 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 CYP4V2Q6ZWL3 525 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-201ENST00000340611 FAM131BQ86XD5 332 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 SLC25A41Q8N5S1 370 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 SPO11Q9Y5K1 396 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 CDY1Q9Y6F8 540 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 GOLGA8MH3BSY2 632 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 FYNP06241 537 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 ATP6V1B1P15313 513 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 TYMPP19971 482 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 TAP1Q03518 808 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 RNF19BQ6ZMZ0 732 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 ANKMY2Q8IV38 441 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 TMEM199Q8N511 208 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 HSFY1Q96LI6 401 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 CNPY3Q9BT09 278 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 CALN1Q9BXU9 219 aa15.42■□□□□ 0.06
BRAT1-201ENST00000340611 SF3B1O75533 1304 aaKnown RBP eCLIP15.41■□□□□ 0.064e-18■■■■■ 149.3
BRAT1-201ENST00000340611 ATP9BO43861 1147 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 OAZ2O95190 189 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 KRT4P19013 534 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 PCSK6P29122 969 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 TBL3Q12788 808 aaKnown RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 PYROXD2Q8N2H3 581 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 SLITRK1Q96PX8 696 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 OSBPL8Q9BZF1 889 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 C2orf71A6NGG8 1288 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 GSC2O15499 205 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 PRPF4O43172 522 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■■■□ 20.4
BRAT1-201ENST00000340611 PSTPIP1O43586 416 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 GEMIN4P57678 1058 aaKnown RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■■■ 29.8
BRAT1-201ENST00000340611 CTC1Q2NKJ3 1217 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 KLHDC10Q6PID8 442 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 KCNT2Q6UVM3 1135 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 SLC26A9Q7LBE3 791 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 RASSF3Q86WH2 238 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 ZBED8Q8IZ13 594 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 ZCCHC9Q8N567 271 aaKnown RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 TAB3Q8N5C8 712 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 TMCO5AQ8N6Q1 288 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 CCDC185Q8N715 623 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 YME1L1Q96TA2 773 aa15.41■□□□□ 0.06
BRAT1-201ENST00000340611 FBXO6Q9NRD1 293 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-201ENST00000340611 VILLO15195 856 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 HOXA2O43364 376 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 TRUB2O95900 331 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SH3BGRP55822 239 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 CDC16Q13042 620 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SLC45A4Q5BKX6 768 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 PPP6R3Q5H9R7 873 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 NIPA2Q8N8Q9 360 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 DGCR14Q96DF8 476 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SEPT5Q99719 369 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 MRPL9Q9BYD2 267 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 ASNSD1Q9NWL6 643 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SELENONQ9NZV5 590 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 TRAFD1O14545 582 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 VNN2O95498 520 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 NCAM1P13591 858 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 FGFR3P22607 806 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 KLRC2P26717 231 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 RPL34P49207 117 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SULT1E1P49888 294 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SERPINB8P50452 374 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SLC5A3P53794 718 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 DAOAP59103 153 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 YWHAZP63104 245 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 FYB2Q5VWT5 728 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 DQX1Q8TE96 717 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 USP29Q9HBJ7 922 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 UTP6Q9NYH9 597 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 PTTG2Q9NZH5 202 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 HEY2Q9UBP5 337 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 ZNF212Q9UDV6 495 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 ZNF148Q9UQR1 794 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 ABHD14A-ACY1A0A1B0GW23 586 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
BRAT1-201ENST00000340611 DMPKQ09013 629 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 GPS1Q13098 491 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 DUSP4Q13115 394 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 CCNG2Q16589 344 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 SPOCD1Q6ZMY3 1216 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 BHLHA9Q7RTU4 235 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 KCTD6Q8NC69 237 aa15.4■□□□□ 0.06
BRAT1-201ENST00000340611 CFAP61Q8NHU2 1237 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms