RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZBTB14O43829 449 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 RHOP08100 348 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 CFHP08603 1231 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 SLC35G4P0C7Q5 338 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 GPR17Q13304 367 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 TRIM15Q9C019 465 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 GJD2Q9UKL4 321 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 NR1D1P20393 614 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 EFL1Q7Z2Z2 1120 aaKnown RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 JADE3Q92613 823 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 ERP44Q9BS26 406 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 SOWAHAQ2M3V2 549 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 CRTC3Q6UUV7 619 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 ECT2Q9H8V3 914 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 RUVBL2Q9Y230 463 aaKnown RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 FPGTO14772 594 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 NDUFB5O43674 189 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 SUZ12Q15022 739 aaKnown RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 STRADAQ7RTN6 431 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 FBXO36Q8NEA4 188 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 ASPSCR1Q9BZE9 553 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 CATSPERZQ9NTU4 200 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 PCDHA11Q9Y5I1 949 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 HOXB8P17481 243 aaPredicted RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 IFT88Q13099 833 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 HLA-DQA1Q5Y7H0 255 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 FAM47EQ6ZV65 393 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 VPS37AQ8NEZ2 397 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 OTUB1Q96FW1 271 aaPredicted RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 EFHD1Q9BUP0 239 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.326e-8■■■■□ 22.2
LIN54-201ENST00000340417 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 CST5P28325 142 aaPredicted RBP13.03□□□□□ -0.32
LIN54-201ENST00000340417 FMO4P31512 558 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 GPC1P35052 558 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 MMGT1Q8N4V1 131 aa13.03□□□□□ -0.32
LIN54-201ENST00000340417 QSOX1O00391 747 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 RAD51CO43502 376 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 SLC2A4P14672 509 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 RHOQP17081 205 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 RBL1P28749 1068 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 FMO1Q01740 532 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 WDR48Q8TAF3 677 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 CD101Q93033 1021 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 KLHL5Q96PQ7 755 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 H3BMM5 538 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 APOC2P02655 101 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.32
LIN54-201ENST00000340417 HOXB2P14652 356 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 SERPINB8P50452 374 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 DEFB103AP81534 67 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 LRRC74AQ0VAA2 488 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 MPP3Q13368 585 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 PARP6Q2NL67 630 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 VPS50Q96JG6 964 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 WRAP53Q9BUR4 548 aaKnown RBP13.02□□□□□ -0.32
LIN54-201ENST00000340417 TAS2R13Q9NYV9 303 aa13.02□□□□□ -0.32
LIN54-201ENST00000340417 COL18A1P39060 1754 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 A0A1W2PQ67 120 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 FTH1P02794 183 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 CD151P48509 253 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 CASP8Q14790 479 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 SETD7Q8WTS6 366 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 PPCSQ9HAB8 311 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 A0A088AWK7 358 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 MTMR11A4FU01 709 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 GRXCR1A8MXD5 290 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 GPR32O75388 356 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 POP4O95707 220 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 CATP04040 527 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 PABPC1P11940 636 aaKnown RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 HPGDP15428 266 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
LIN54-201ENST00000340417 MGAT1P26572 445 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 SLC20A2Q08357 652 aa13.02□□□□□ -0.33
LIN54-201ENST00000340417 ITGA9Q13797 1035 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms