RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 MT-CO1P00395 513 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 ZNF286BP0CG31 522 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 HARS2P49590 506 aaKnown RBP12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 OGFRL1Q5TC84 451 aaPredicted RBP12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 STEAP4Q687X5 459 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 PID1Q7Z2X4 250 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 LCA5Q86VQ0 697 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 VCX3BQ9H321 246 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 ELP3Q9H9T3 547 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 GOLGA2P5Q9HBQ8 144 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 VCX3AQ9NNX9 186 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 CHRAC1Q9NRG0 131 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 DCDC2Q9UHG0 476 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 SLC39A10Q9ULF5 831 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 COMMD3-BMI1R4GMX3 469 aa12.2□□□□□ -0.46
CCDC144CP-201ENST00000340196 MAGEB3O15480 346 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 C2P06681 752 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 P4HA1P13674 534 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PGAM1P18669 254 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 FUT4P22083 530 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 NDUFV1P49821 464 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PKDCCQ504Y2 493 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PCDH20Q8N6Y1 951 aaKnown RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 KCNN1Q92952 543 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 TMIGD2Q96BF3 282 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 OLFM3Q96PB7 478 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PCDHAC1Q9H158 963 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 ANLNQ9NQW6 1124 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 ZDHHC2Q9UIJ5 367 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PCDHB12Q9Y5F1 795 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 USP3Q9Y6I4 520 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 MCM3APO60318 1980 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 CLDN5O00501 218 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 SOCS7O14512 581 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 INSRRP14616 1297 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 NAGLUP54802 743 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 DCAF6Q58WW2 860 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 LRRC8BQ6P9F7 803 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 H3BSA7 217 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PFDN1O60925 122 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 IL18RAPO95256 599 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PIGNO95427 931 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 PENKP01210 267 aaPredicted RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 ASLP04424 464 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 DESP17661 470 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 GP5P40197 560 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 RALGDSQ12967 914 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 ARL13AQ5H913 290 aaPredicted RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 HFE2Q6ZVN8 426 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 RIOX2Q8IUF8 465 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 DEFB106AQ8N104 65 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 ATP6V1E2Q96A05 226 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 IARS2Q9NSE4 1012 aaKnown RBP12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 SNTG2Q9NY99 539 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 SORCS3Q9UPU3 1222 aa12.19□□□□□ -0.46
CCDC144CP-201ENST00000340196 NEMP2A6NFY4 417 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 DPYSL4O14531 572 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 BEST1O76090 585 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 C22orf31O95567 290 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 SBK3P0C264 359 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 SULT1E1P49888 294 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 SYPL2Q5VXT5 272 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 GK5Q6ZS86 529 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 TMEM110Q86TL2 294 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 CPNE9Q8IYJ1 553 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 ARHGAP18Q8N392 663 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 JADE3Q92613 823 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 LRGUKQ96M69 825 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 RBBP8Q99708 897 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 TASP1Q9H6P5 420 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 KLK14Q9P0G3 267 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 CASQ2O14958 399 aaPredicted RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 RNASEH2AO75792 299 aaKnown RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 ALOX15P16050 662 aaPredicted RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 MX2P20592 715 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 ACAT1P24752 427 aaKnown RBP12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 GRK2P25098 689 aa12.18□□□□□ -0.46
CCDC144CP-201ENST00000340196 GRIA4P48058 902 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms