RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 DONSONQ9NYP3 566 aa21.65■■□□□ 1.06
VRK2-201ENST00000340157 RGS16O15492 202 aaPredicted RBP21.64■■□□□ 1.06
VRK2-201ENST00000340157 RAMP2O60895 175 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 CLASP2O75122 1294 aaKnown RBP21.64■■□□□ 1.06
VRK2-201ENST00000340157 AP2A1O95782 977 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 HLA-DQB2P05538 268 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 ACVRL1P37023 503 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 EFTUD2Q15029 972 aaKnown RBP eCLIP21.64■■□□□ 1.069e-7■■■■■ 40
VRK2-201ENST00000340157 PPM1LQ5SGD2 360 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 Q6ZNB5 142 aa21.64■■□□□ 1.06
VRK2-201ENST00000340157 MRPS31Q92665 395 aaKnown RBP21.64■■□□□ 1.06
VRK2-201ENST00000340157 PIAS1O75925 651 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 SUN1O94901 812 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 MLNP12872 115 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 TSHRP16473 764 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 PBX2P40425 430 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 MAGOHP61326 146 aaKnown RBP21.64■■□□□ 1.05
VRK2-201ENST00000340157 POLD3Q15054 466 aaPredicted RBP21.64■■□□□ 1.05
VRK2-201ENST00000340157 CROCCP2Q86T23 111 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 PALM2Q8IXS6 379 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 CYP4X1Q8N118 509 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 FBF1Q8TES7 1133 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 FATE1Q969F0 183 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 ATXN3LQ9H3M9 355 aa21.64■■□□□ 1.05
VRK2-201ENST00000340157 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.63■■□□□ 1.05
VRK2-201ENST00000340157 EXOC1LA0A1B0GW35 172 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 USP12O75317 370 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 MYL4P12829 197 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 NR1D1P20393 614 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 ERVK-21P61565 698 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 SERINC3Q13530 473 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 PARP15Q460N3 678 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 ELMOD1Q8N336 334 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 LRRC39Q96DD0 335 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 TGS1Q96RS0 853 aaKnown RBP21.63■■□□□ 1.05
VRK2-201ENST00000340157 GLOD4Q9HC38 313 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 ASAH2Q9NR71 780 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 RBM22Q9NW64 420 aaKnown RBP eCLIP21.63■■□□□ 1.05
VRK2-201ENST00000340157 UBP1Q9NZI7 540 aa21.63■■□□□ 1.05
VRK2-201ENST00000340157 PDE4DIPQ5VU43 2346 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 A0A0D9SEW6 157 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 GFRA2O00451 464 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 C1QAP02745 245 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 CDC25CP30307 473 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 NUMBP49757 651 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 EPHA5P54756 1037 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 CDH4P55283 916 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 YBEYP58557 167 aaPredicted RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 SLC7A9P82251 487 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 EMC10Q5UCC4 262 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.62■■□□□ 1.05
VRK2-201ENST00000340157 SPATA22Q8NHS9 363 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 CFAP36Q96G28 342 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 PKNOX2Q96KN3 472 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 EBNA1BP2Q99848 306 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 ACSS3Q9H6R3 686 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 ZC3H7BQ9UGR2 993 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 LGALS13Q9UHV8 139 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 MYLKQ15746 1914 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 TCRBV9S1A1TA0A576 114 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 FOXO6A8MYZ6 492 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 PER2O15055 1255 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 TSPAN3O60637 253 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 MOSPD3O75425 235 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 CRADDP78560 199 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 SARNPP82979 210 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 SLC10A7Q0GE19 358 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 RABGAP1LQ5R372 815 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 OR52K1Q8NGK4 314 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 SHKBP1Q8TBC3 707 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 ARNTL2Q8WYA1 636 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 ARHGEF2Q92974 986 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 TCEAL4Q96EI5 215 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 XPO6Q96QU8 1125 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 FCRL5Q96RD9 977 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 SLC46A2Q9BY10 475 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 DNMT3BQ9UBC3 853 aaKnown RBP21.62■■□□□ 1.05
VRK2-201ENST00000340157 TTLL3Q9Y4R7 772 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 PCDHA11Q9Y5I1 949 aa21.62■■□□□ 1.05
VRK2-201ENST00000340157 LATS1O95835 1130 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 MT-CYBP00156 380 aaPredicted RBP21.61■■□□□ 1.05
VRK2-201ENST00000340157 AGTP01019 485 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 CKMP06732 381 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 IVLP07476 585 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 HPDP32754 393 aaPredicted RBP21.61■■□□□ 1.05
VRK2-201ENST00000340157 HNRNPDQ14103 355 aaKnown RBP21.61■■□□□ 1.05
VRK2-201ENST00000340157 KDM7AQ6ZMT4 941 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 UNC5AQ6ZN44 842 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 CCDC77Q9BR77 488 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 RETREG1Q9H6L5 497 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 MIA3Q5JRA6 1907 aa21.61■■□□□ 1.05
VRK2-201ENST00000340157 ERI2A8K979 691 aaKnown RBP21.6■■□□□ 1.05
VRK2-201ENST00000340157 POC1B-GALNT4F8VUJ3 575 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 LPXNO60711 386 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 CDH16O75309 829 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 CPP00450 1065 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 MGAT1P26572 445 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 HOXD9P28356 352 aaPredicted RBP21.6■■□□□ 1.05
VRK2-201ENST00000340157 PHBP35232 272 aa21.6■■□□□ 1.05
VRK2-201ENST00000340157 MMP13P45452 471 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms