RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TEDDM1Q5T9Z0 273 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 DEFB107AQ8IZN7 70 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 FBXW8Q8N3Y1 598 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 TOP6BLQ8N6T0 577 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 ZFP28Q8NHY6 868 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 CATSPER2Q96P56 530 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 DHX35Q9H5Z1 703 aaKnown RBP19.18■□□□□ 0.66
PSPC1-201ENST00000338910 RHBDL2Q9NX52 303 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 LZTS1Q9Y250 596 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 TIMM13Q9Y5L4 95 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-201ENST00000338910 hCG_2014768A0A024R1R8 64 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 APOL1O14791 398 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 PTPN1P18031 435 aaKnown RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 DBN1Q16643 649 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 FASTKD1Q53R41 847 aaKnown RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 MBLAC2Q68D91 279 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 MAVSQ7Z434 540 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 ALDH16A1Q8IZ83 802 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 FAM149B1Q96BN6 582 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 DCUN1D1Q96GG9 259 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 TBCBQ99426 244 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 NRDE2Q9H7Z3 1164 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 PLK2Q9NYY3 685 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 APOEP02649 317 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 PTPN9P43378 593 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 ACADSBP45954 432 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 MGAT3Q09327 533 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 ADIGQ0VDE8 80 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 ACBD5Q5T8D3 534 aaPredicted RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 KIAA0319Q5VV43 1072 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 ZFRQ96KR1 1074 aaKnown RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 HSFY1Q96LI6 401 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 DUSP16Q9BY84 665 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 FRMD8Q9BZ67 464 aaPredicted RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 SHCBP1LQ9BZQ2 653 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 DNAI2Q9GZS0 605 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 RAB6BQ9NRW1 208 aa19.17■□□□□ 0.66
PSPC1-201ENST00000338910 DDX18Q9NVP1 670 aaKnown RBP19.17■□□□□ 0.66
PSPC1-201ENST00000338910 MDM4O15151 490 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 RPL34P49207 117 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 NDUFV1P49821 464 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CLCNKBP51801 687 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 RABGGTBP53611 331 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 MTTPP55157 894 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 MROH9Q5TGP6 573 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CAND1Q86VP6 1230 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PPP1R14CQ8TAE6 165 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CD99L2Q8TCZ2 262 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 TFB1MQ8WVM0 346 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CENPIQ92674 756 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CMTM5Q96DZ9 223 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 SENP8Q96LD8 212 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 HNRNPABQ99729 332 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 MED10Q9BTT4 135 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 C11orf84Q9BUA3 381 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 MRPS26Q9BYN8 205 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 TIMMDC1Q9NPL8 285 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 SRRDQ9UH36 339 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PCDHGB4Q9UN71 923 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 DMTF1Q9Y222 760 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PCDHGB5Q9Y5G0 923 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 KCNN4O15554 427 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 COQ9O75208 318 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 TOMM70O94826 608 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 THP07101 528 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 FGF3P11487 239 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CLCN2P51788 898 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 MYLK3Q32MK0 819 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 FRMD7Q6ZUT3 714 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PQLC1Q8N2U9 271 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 CCDC185Q8N715 623 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 EFCAB3Q8N7B9 438 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 RNF169Q8NCN4 708 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 TRMT13Q9NUP7 481 aaKnown RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 C6orf203Q9P0P8 240 aaPredicted RBP19.16■□□□□ 0.66
PSPC1-201ENST00000338910 PSMD13Q9UNM6 376 aa19.16■□□□□ 0.66
PSPC1-201ENST00000338910 XPO1O14980 1071 aaKnown RBP19.15■□□□□ 0.66
PSPC1-201ENST00000338910 MYL4P12829 197 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 CYP2F1P24903 491 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 RBL1P28749 1068 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 CD52P31358 61 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 IDH3AP50213 366 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 EMP3P54852 163 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 HSP90AA5PQ58FG0 334 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 DEFB106AQ8N104 65 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 GAB3Q8WWW8 586 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 GRIP2Q9C0E4 1043 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 ZNF696Q9H7X3 374 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 PADI3Q9ULW8 664 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 AP4E1Q9UPM8 1137 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 CCDC160A6NGH7 325 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 ARL5CA6NH57 179 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 GPR182O15218 404 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 SLC1A6P48664 564 aa19.15■□□□□ 0.66
PSPC1-201ENST00000338910 SULT2A1Q06520 285 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms