RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PLXNB3Q9ULL4 1909 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 F8VZ95 297 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 CLDN11O75508 207 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 CTSLP07711 333 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 RHOCP08134 193 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SRCP12931 536 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 RRM1P23921 792 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 GRIA4P48058 902 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ADPRHP54922 357 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SNX16P57768 344 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 RACK1P63244 317 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ATP11AP98196 1134 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 FMO1Q01740 532 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SULT2A1Q06520 285 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 BNIP3Q12983 259 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 CDKAL1Q5VV42 579 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 FAM131BQ86XD5 332 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 JOSD2Q8TAC2 188 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 BAHD1Q8TBE0 780 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 PIP4K2CQ8TBX8 421 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ADAMTS14Q8WXS8 1223 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 TNKS2Q9H2K2 1166 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ARHGAP20Q9P2F6 1191 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 NOCTQ9UK39 431 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 ZFHX4Q86UP3 3567 aa13.72□□□□□ -0.21
NUDCD3-201ENST00000338427 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 E9PAM4 449 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 VILLO15195 856 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ADH1BP00325 375 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 CAPNS1P04632 268 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF883P0CG24 379 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 COPB1P53618 953 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 CLDN6P56747 220 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 C21orf59P57076 290 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 TAS2R38P59533 333 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ELAVL3Q14576 367 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 RXFP2Q8WXD0 754 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 OR8D1Q8WZ84 308 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 ARRDC3Q96B67 414 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 PGAP3Q96FM1 320 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 SERAC1Q96JX3 654 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 SPAG5Q96R06 1193 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 METTL5Q9NRN9 209 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 NDFIP2Q9NV92 336 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 RRN3Q9NYV6 651 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 VPS51Q9UID3 782 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 SIK3Q9Y2K2 1263 aa13.71□□□□□ -0.21
NUDCD3-201ENST00000338427 WDFY3Q8IZQ1 3526 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 A0A1B0GTQ1 180 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 SRRM3A6NNA2 597 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM72CH0Y354 149 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 MCF2LO15068 1137 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 TRIM16O95361 564 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 F9P00740 461 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 CYP1A1P04798 512 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 CD38P28907 300 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 CCR5P51681 352 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 JAM2P57087 298 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 SCAPQ12770 1279 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 SUZ12Q15022 739 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 SYCP1Q15431 976 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 CDO1Q16878 200 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 CCDC14Q49A88 953 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM72AQ5TYM5 149 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM72DQ6L9T8 149 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 BNIPLQ7Z465 357 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 GLRX5Q86SX6 157 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM72BQ86X60 149 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 SPATS2Q86XZ4 545 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 NETO2Q8NC67 525 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 OR2A12Q8NGT7 310 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 C1orf74Q96LT6 269 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 MYOCQ99972 504 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 C11orf70Q9BRQ4 267 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 ACE2Q9BYF1 805 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 ZNF212Q9UDV6 495 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 STAP1Q9ULZ2 295 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 PCDHGB2Q9Y5G2 931 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 ZZEF1O43149 2961 aa13.7□□□□□ -0.22
NUDCD3-201ENST00000338427 IGF2RP11717 2491 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 FAM149AA5PLN7 773 aa13.69□□□□□ -0.22
NUDCD3-201ENST00000338427 TLR4O00206 839 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms