RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TPGS1Q6ZTW0 290 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 CARNMT1Q8N4J0 409 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 CNTD1Q8N815 330 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 OR7D4Q8NG98 312 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 DDI1Q8WTU0 396 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 EXOC4Q96A65 974 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 TEKT5Q96M29 485 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 RBM15Q96T37 977 aaKnown RBP eCLIP15.07■□□□□ 01e-6■■■□□ 17.1
CDK5RAP3-201ENST00000338399 MAGEH1Q9H213 219 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 SEMA4AQ9H3S1 761 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 IGSF9Q9P2J2 1179 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 TBC1D30Q9Y2I9 924 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 MYOFQ9NZM1 2061 aa15.07■□□□□ 0
CDK5RAP3-201ENST00000338399 E7EVH7 732 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 H0Y626 953 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 MAGEA6P43360 314 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ZNF77Q15935 545 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 IL31Q6EBC2 164 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 CXorf57Q6NSI4 855 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ANKRD54Q6NXT1 300 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 SYCE2Q6PIF2 218 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 GPR149Q86SP6 731 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 SETD3Q86TU7 594 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 MAML1Q92585 1016 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 IL12RB2Q99665 862 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 VIPAS39Q9H9C1 493 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 RBM22Q9NW64 420 aaKnown RBP eCLIP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 PLK2Q9NYY3 685 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 RSPH14Q9UHP6 348 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 PRRC2BQ5JSZ5 2229 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ILVBLA1L0T0 632 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 LUC7L3O95232 432 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 PEX11BO96011 259 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 NFKB1P19838 968 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 FSHRP23945 695 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 LMAN1P49257 510 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 IL10RBQ08334 325 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 HIF1AQ16665 826 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ANO4Q32M45 955 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 MPPE1Q53F39 396 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 FSCBQ5H9T9 825 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 FNBP1LQ5T0N5 605 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ITPRIPL1Q6GPH6 555 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 PABPC5Q96DU9 382 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 ZNF419Q96HQ0 510 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 SPON2Q9BUD6 331 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 GBA3Q9H227 469 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 SAYSD1Q9NPB0 183 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 TTLL3Q9Y4R7 772 aa15.06■□□□□ 0
CDK5RAP3-201ENST00000338399 BANF1O75531 89 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 NEBLO76041 1014 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 TPSB2P20231 275 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 ARL4CP56559 192 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 USP4Q13107 963 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 ADAM15Q13444 863 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 MTM1Q13496 603 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 HNRNPDQ14103 355 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 TPSAB1Q15661 275 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 HP1BP3Q5SSJ5 553 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 CFAP58Q5T655 872 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 UBAP2Q5T6F2 1119 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 RNF219Q5W0B1 726 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 OTOP3Q7RTS5 596 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 NPAS3Q8IXF0 933 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 PDCD7Q8N8D1 485 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 WFDC5Q8TCV5 224 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 GORASP1Q9BQQ3 440 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 MUC3BQ9H195 1237 aa15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 CDC42EP4Q9H3Q1 356 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-201ENST00000338399 REV3LO60673 3130 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 PRAMEF11O60813 436 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 HLA-DQB2P05538 268 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 HOXD9P28356 352 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 RENBPP51606 427 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 FAM193AP78312 1265 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 SLC10A7Q0GE19 358 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 PDIA2Q13087 525 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 CDH18Q13634 790 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 MSS51Q4VC12 460 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 PPP1R21Q6ZMI0 780 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 CEP128Q6ZU80 1094 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 CENPUQ71F23 418 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 GET4Q7L5D6 327 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 MFN1Q8IWA4 741 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 NSMCE1Q8WV22 266 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 FATE1Q969F0 183 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 ZIM3Q96PE6 472 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 LINC00597Q9H2U6 94 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 EPB41L4BQ9H329 900 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 PABPC3Q9H361 631 aaKnown RBP15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 ATP13A1Q9HD20 1204 aa15.04■□□□□ -0
CDK5RAP3-201ENST00000338399 AVILO75366 819 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 CYBBP04839 570 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 TCF3P15923 654 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 GLDCP23378 1020 aa15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 MZF1P28698 734 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-201ENST00000338399 GRIA1P42261 906 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms