RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 F5P12259 2224 aa12.19□□□□□ -0.46
SPTLC1-202ENST00000337841 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 C3orf70A6NLC5 250 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 DFFAO00273 331 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 APOL1O14791 398 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ACVRL1P37023 503 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 WASP42768 502 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 CDKN2BP42772 138 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 CTSOP43234 321 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 MTAPQ13126 283 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 SERINC3Q13530 473 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 STARD3Q14849 445 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ACCSLQ4AC99 568 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 AFMIDQ63HM1 303 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 Q6ZS52 159 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 SYT13Q7L8C5 426 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 HMCESQ96FZ2 354 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 HES6Q96HZ4 224 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 CELF6Q96J87 481 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 RPL10LQ96L21 214 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ACOX2Q99424 681 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 PSMB7Q99436 277 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 NOL6Q9H6R4 1146 aaKnown RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 LRRC19Q9H756 370 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 POLMQ9NP87 494 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 ETNK2Q9NVF9 386 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 CACNA2D2Q9NY47 1150 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 HCN2Q9UL51 889 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 MMP17Q9ULZ9 603 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 EFR3BQ9Y2G0 817 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 KIF26AQ9ULI4 1882 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 BDP1A6H8Y1 2624 aa12.18□□□□□ -0.46
SPTLC1-202ENST00000337841 SGK1O00141 431 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 SNAP91O60641 907 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 ZMPSTE24O75844 475 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 ALDH1A2O94788 518 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 EPHX1P07099 455 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 MX2P20592 715 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 MARCKSL1P49006 195 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 CLCN6P51797 869 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 DGKEP52429 567 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 ENPP2Q13822 863 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 GAS6Q14393 721 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 PPP2R5EQ16537 467 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 TAZQ16635 292 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 PTPRNQ16849 979 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 CCDC181Q5TID7 509 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 KAZNQ674X7 775 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 NSMCE1Q8WV22 266 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 GABRG3Q99928 467 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 ZDHHC4Q9NPG8 344 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 PACSIN2Q9UNF0 486 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 RAD54BQ9Y620 910 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 UNC80Q8N2C7 3258 aa12.17□□□□□ -0.46
SPTLC1-202ENST00000337841 TECTAO75443 2155 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 hCG_1818297A0A087WSY0 165 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 TARSL2A2RTX5 802 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 ANTXRLA6NF34 631 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 WASH3PC4AMC7 463 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 DDX3YO15523 660 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 ATP9BO43861 1147 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 CST8O60676 142 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 TJP3O95049 919 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 PYGMP11217 842 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 KRT10P13645 584 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 HOXB2P14652 356 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 IL12RB1P42701 662 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 NR2C2P49116 596 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 NUMBP49757 651 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 DNA2P51530 1060 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 DLG2Q15700 870 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 CRY1Q16526 586 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 INO80DQ53TQ3 878 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 SLC9A4Q6AI14 798 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 ARHGAP12Q8IWW6 846 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 SH2D3CQ8N5H7 860 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 CAMKK1Q8N5S9 505 aa12.16□□□□□ -0.46
SPTLC1-202ENST00000337841 PLD5Q8N7P1 536 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms