RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SNRPFP62306 86 aaKnown RBP13.46□□□□□ -0.26
COL2A1-201ENST00000337299 CXCL9Q07325 125 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 TKFCQ3LXA3 575 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 HYIQ5T013 277 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 LRRC8DQ7L1W4 858 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 FBXO30Q8TB52 745 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 ACTRT2Q8TDY3 377 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 KCTD4Q8WVF5 259 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 HSD17B14Q9BPX1 270 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 WDR18Q9BV38 432 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 FZD1Q9UP38 647 aa13.46□□□□□ -0.26
COL2A1-201ENST00000337299 CLDN25C9JDP6 229 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 RNF103O00237 685 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 FGRP09769 529 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 CRHR1P34998 444 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 HOXD12P35452 270 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 URGCPQ8TCY9 931 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 DENND1AQ8TEH3 1009 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 DMRTB1Q96MA1 342 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 PCDHA2Q9Y5H9 948 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 PMF1-BGLAPU3KQ54 211 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 GAKO14976 1311 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 CLUHO75153 1309 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 TNPO2O14787 897 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 IL1R1P14778 569 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 MADCAM1Q13477 382 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SPANXN2Q5MJ10 180 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SPESP1Q6UW49 350 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 UNC5BQ8IZJ1 945 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 UBR7Q8N806 425 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 OR52K1Q8NGK4 314 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 OR9Q1Q8NGQ5 310 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 OSCP1Q8WVF1 389 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 POMKQ9H5K3 350 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 RPRD1BQ9NQG5 326 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 ANAPC2Q9UJX6 822 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 TMEM191CA6NGB0 347 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 PFDN6O15212 129 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 H2AFYO75367 372 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 JCHAINP01591 159 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 CDKN2BP42772 138 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 HADHBP55084 474 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 NEK10Q6ZWH5 1172 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 ACOT1Q86TX2 421 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 NKD2Q969F2 451 aaPredicted RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 EGFL8Q99944 293 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
COL2A1-201ENST00000337299 VTI1BQ9UEU0 232 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 LIMD1Q9UGP4 676 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 PIK3C2AO00443 1686 aa13.45□□□□□ -0.26
COL2A1-201ENST00000337299 NOTOA8MTQ0 251 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 E7ENX8 843 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 M0R2N6 131 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 LZTS3O60299 673 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PLIN3O60664 434 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 HUS1O60921 280 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 FAM20BO75063 409 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CDH2P19022 906 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CDK9P50750 372 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 AP3M2P53677 418 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SCUBE3Q8IX30 993 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CERS5Q8N5B7 392 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 KCTD17Q8N5Z5 321 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 NSUN6Q8TEA1 469 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 HTR3CQ8WXA8 447 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 HERPUD2Q9BSE4 406 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TBCDQ9BTW9 1192 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 NT5C1AQ9BXI3 368 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 DISP2A7MBM2 1401 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 A0A088AWK7 358 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ERI2A8K979 691 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TRIM24O15164 1050 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 LSM8O95777 96 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 IL12AP29459 219 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms