RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 NFKB1P19838 968 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RBM34P42696 430 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 UBXN2AP68543 259 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SLC9A5Q14940 896 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PIWIL4Q7Z3Z4 852 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 WDR49Q8IV35 697 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF285Q96NJ3 590 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MRPL57Q9BQC6 102 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MTG1Q9BT17 334 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DGCR6LQ9BY27 220 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ABCB10Q9NRK6 738 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TAS2R13Q9NYV9 303 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PTBP2Q9UKA9 531 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 FADS3Q9Y5Q0 445 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DISP2A7MBM2 1401 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 H7C1W4 665 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RNASEH1O60930 286 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SERPINA3P01011 423 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GLI1P08151 1106 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PSMA1P25786 263 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PTPN3P26045 913 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 HOXA13P31271 388 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 UGT1A5P35504 534 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 HUNKP57058 714 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SF3B3Q15393 1217 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 METTL3Q86U44 580 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ERI1Q8IV48 349 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PANX3Q96QZ0 392 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 KCTD10Q9H3F6 313 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MARCH7Q9H992 704 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SCUBE2Q9NQ36 999 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PCDHGA3Q9Y5H0 932 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 USP17L3A6NCW0 530 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 USP17L4A6NCW7 530 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PDLIM1O00151 329 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DPYSL4O14531 572 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GATBO75879 557 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TM7SF2O76062 418 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 OR6B1O95007 311 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MMP14P50281 582 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ALG11Q2TAA5 492 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 VPS26BQ4G0F5 336 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TTMPQ5BVD1 217 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ARMC6Q6NXE6 501 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 USP17L1Q7RTZ2 530 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TIGD4Q8IY51 512 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CCDC107Q8WV48 283 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SCGB3A2Q96PL1 93 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GPR63Q9BZJ6 419 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 IL22Q9GZX6 179 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GABBR1Q9UBS5 961 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PSMD13Q9UNM6 376 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GPIP06744 558 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DARSP14868 501 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CYP11B1P15538 503 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 AIF1P55008 147 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GRHL2Q6ISB3 625 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 IPMKQ8NFU5 416 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GANCQ8TET4 914 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CREB3L1Q96BA8 519 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 C12orf4Q9NQ89 552 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SMPD3Q9NY59 655 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SPASTQ9UBP0 616 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 LNPEPQ9UIQ6 1025 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TBX20Q9UMR3 447 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NWD1Q149M9 1564 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 IFNGP01579 166 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PET100P0DJ07 73 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PRG2P13727 222 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PLD1Q13393 1074 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 RRP1BQ14684 758 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PQLC1Q8N2U9 271 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ATL1Q8WXF7 558 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GMCL1Q96IK5 515 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 V9GYQ6 96 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 DHRS12A0PJE2 317 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CLRN2A0PK11 232 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TCP10L2B9ZVM9 353 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TPST1O60507 370 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CHRNGP07510 517 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 NR2F6P10588 404 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 EIF2S3LQ2VIR3 472 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 THAP5Q7Z6K1 395 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 IL17REQ8NFR9 667 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF420Q8TAQ5 688 aaPredicted RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TEX47Q8TBZ9 253 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TCP10LQ8TDR4 215 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 THRSPQ92748 146 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF607Q96SK3 696 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 CGRRF1Q99675 332 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TBC1D10AQ9BXI6 508 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 OR2B2Q9GZK3 357 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 BTG4Q9NY30 223 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SLC9A8Q9Y2E8 581 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SETD1AO15047 1707 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 H0YJX3 145 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SMNDC1O75940 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 UGT2B15P54855 530 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TBX2Q13207 712 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 518.2 ms