RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MLPHQ9BV36 600 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 NUF2Q9BZD4 464 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
VPS33B-201ENST00000333371 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 INPP5FQ9Y2H2 1132 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 AK5Q9Y6K8 562 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 MYLKQ15746 1914 aa12.57□□□□□ -0.4
VPS33B-201ENST00000333371 DOCK3Q8IZD9 2030 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 MYOCOSA0A1B0GUC4 107 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 STX16-NPEPL1H3BU86 382 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 KIF3CO14782 793 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 PGM3O95394 542 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 UQCRBP14927 111 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 NMBRP28336 390 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 GARSP41250 739 aaKnown RBP12.56□□□□□ -0.4
VPS33B-201ENST00000333371 CDK7P50613 346 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SNX16P57768 344 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 DPYSQ14117 519 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 INSCQ1MX18 579 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 MMEL1Q495T6 779 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 ANKRD20A4Q4UJ75 823 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 LIN52Q52LA3 116 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 AP1ARQ63HQ0 302 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 ACAD11Q709F0 780 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 APLFQ8IW19 511 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-201ENST00000333371 MFN1Q8IWA4 741 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 C20orf96Q9NUD7 363 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-201ENST00000333371 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 ARHGAP26Q9UNA1 814 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 TSC2P49815 1807 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 RRN3P2A6NIE6 340 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 DCLK1O15075 740 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 CFLARO15519 480 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SPATA31D3P0C874 917 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SPRP35270 261 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SERPINB8P50452 374 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 MTTPP55157 894 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 MAP3K7CLP57077 242 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 GRM3Q14832 879 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 DBN1Q16643 649 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SPANXN3Q5MJ09 141 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SPATA31D4Q6ZUB0 917 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 LRRC52Q8N7C0 313 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 PTPN18Q99952 460 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 SPATA16Q9BXB7 569 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 LRRC40Q9H9A6 602 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 NMRAL1Q9HBL8 299 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 TTC3P53804 2025 aa12.56□□□□□ -0.4
VPS33B-201ENST00000333371 PIRO00625 290 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 FYNP06241 537 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 SBK3P0C264 359 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 NFKB1P19838 968 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 MAGEA12P43365 314 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 THOP1P52888 689 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 MRPS22P82650 360 aaKnown RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 BIRC2Q13490 618 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 GK3PQ14409 553 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 LSM12Q3MHD2 195 aaKnown RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 DCAF4L1Q3SXM0 396 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CCDC153Q494R4 210 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 PRAMEF19Q5SWL8 479 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 SATL1Q86VE3 508 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 PSTKQ8IV42 348 aaKnown RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 B3GALNT2Q8NCR0 500 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 APPL2Q8NEU8 664 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CELF6Q96J87 481 aaKnown RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 VPS39Q96JC1 886 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CATSPER2Q96P56 530 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 NPY6RQ99463 290 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 ADAMTS10Q9H324 1103 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CDY2AQ9Y6F7 541 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CDY1Q9Y6F8 540 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 YJEFN3A6XGL0 299 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM233B4DJY2 109 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TRIM13O60858 407 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TOMM70O94826 608 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 XRCC1P18887 633 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 PIK3R1P27986 724 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 RPL34P49207 117 aaKnown RBP12.55□□□□□ -0.4
VPS33B-201ENST00000333371 FOLH1Q04609 750 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 MPP3Q13368 585 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CLEC14AQ86T13 490 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM135Q86UB9 458 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms