RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 KCND1Q9NSA2 647 aa21■□□□□ 0.95
MRPL40-201ENST00000333130 C2orf42Q9NWW7 574 aa21■□□□□ 0.95
MRPL40-201ENST00000333130 CWC15Q9P013 229 aaKnown RBP21■□□□□ 0.95
MRPL40-201ENST00000333130 OR51B4Q9Y5P0 310 aa21■□□□□ 0.95
MRPL40-201ENST00000333130 NUP205Q92621 2012 aa21■□□□□ 0.95
MRPL40-201ENST00000333130 ANTXRLA6NF34 631 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 CBX4O00257 560 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 CTNNA2P26232 953 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 HEATR6Q6AI08 1181 aaKnown RBP20.99■□□□□ 0.95
MRPL40-201ENST00000333130 TMEM92Q6UXU6 159 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 LONP2Q86WA8 852 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 PGBD3Q8N328 593 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 OR52K2Q8NGK3 314 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 UBE2Q2Q8WVN8 375 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 HMGB4Q8WW32 186 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 ALG14Q96F25 216 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 ZNF670Q9BS34 389 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 CALN1Q9BXU9 219 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 TMEM245Q9H330 911 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 DDX56Q9NY93 547 aaKnown RBP20.99■□□□□ 0.95
MRPL40-201ENST00000333130 EBF1Q9UH73 591 aa20.99■□□□□ 0.95
MRPL40-201ENST00000333130 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.99■□□□□ 0.95
MRPL40-201ENST00000333130 A0A0D9SEW6 157 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 EDDM13A0A1B0GTR0 161 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 ZSCAN5CA6NGD5 496 aaPredicted RBP20.98■□□□□ 0.95
MRPL40-201ENST00000333130 C3orf70A6NLC5 250 aaPredicted RBP20.98■□□□□ 0.95
MRPL40-201ENST00000333130 ZNF487B1APH4 448 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 WASH3PC4AMC7 463 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 AXIN1O15169 862 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 CD48P09326 243 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 IL4RP24394 825 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 PRKCHP24723 683 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 SERPINB6P35237 376 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 MARCKSL1P49006 195 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 VASPP50552 380 aaPredicted RBP20.98■□□□□ 0.95
MRPL40-201ENST00000333130 DPYSL3Q14195 570 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 HS1BP3Q53T59 392 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 KATNAL2Q8IYT4 538 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 UMODL1-AS1Q8N2C9 162 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 LZTR1Q8N653 840 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 OR7D4Q8NG98 312 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 RAPGEF5Q92565 580 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 KRT35Q92764 455 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 FAF2Q96CS3 445 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 RPL10LQ96L21 214 aaKnown RBP20.98■□□□□ 0.95
MRPL40-201ENST00000333130 CSPG4P5Q96PW8 444 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 KLHL11Q9NVR0 708 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 VPS51Q9UID3 782 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 PCDHA3Q9Y5H8 950 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 RAD54BQ9Y620 910 aa20.98■□□□□ 0.95
MRPL40-201ENST00000333130 CXorf51AA0A1B0GTR3 108 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 CCDC66A2RUB6 948 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 USP27XA6NNY8 438 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 TDGF1P13385 188 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ERCC2P18074 760 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 CTSOP43234 321 aaPredicted RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 NUMBP49757 651 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 CLCN6P51797 869 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 NDST2P52849 883 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 SLC20A2Q08357 652 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 BYSLQ13895 437 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 HNRNPA1L2Q32P51 320 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ACCSLQ4AC99 568 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 TMCO3Q6UWJ1 677 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 PEX26Q7Z412 305 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 WDR5BQ86VZ2 330 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ATP11CQ8NB49 1132 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 TRIM58Q8NG06 486 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ARHGEF2Q92974 986 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 CCDC114Q96M63 670 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ALS2CR12Q96Q35 445 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 NDFIP2Q9NV92 336 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 POLR3BQ9NW08 1133 aaPredicted RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 AMFRQ9UKV5 643 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 HS3ST2Q9Y278 367 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 A0A1W2PQF6 199 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 TARSL2A2RTX5 802 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 GOLGA6L9A6NEM1 432 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 ARHGAP42A6NI28 874 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 MIF4GDA9UHW6 222 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 RNASEH1O60930 286 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 FTCDO95954 541 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 HLA-EP13747 358 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 KDELR1P24390 212 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 CNR2P34972 360 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 FNTBP49356 437 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 STK19P49842 368 aaPredicted RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 PEX5P50542 639 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 METTL3Q86U44 580 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 RASSF3Q86WH2 238 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 MDGA1Q8NFP4 955 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 HES6Q96HZ4 224 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 SPACA7Q96KW9 195 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 MRGPRX3Q96LB0 322 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 PSMB7Q99436 277 aa20.97■□□□□ 0.95
MRPL40-201ENST00000333130 TRMT1Q9NXH9 659 aaKnown RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 FARP1Q9Y4F1 1045 aaPredicted RBP20.97■□□□□ 0.95
MRPL40-201ENST00000333130 SPAG17Q6Q759 2223 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 EML5Q05BV3 1969 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 LRRD1A4D1F6 860 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms