RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SH3PXD2AQ5TCZ1 1133 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CCDC185Q8N715 623 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SH3BGRLO75368 114 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 NDUFV1P49821 464 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 PACS2Q86VP3 889 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 RBBP8Q99708 897 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 CCT7Q99832 543 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 TM6SF2Q9BZW4 377 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 SNX10Q9Y5X0 201 aa13.22□□□□□ -0.29
VSTM4-202ENST00000332853 MFSD11O43934 449 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 FASTKQ14296 549 aaKnown RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 SLC10A6Q3KNW5 377 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 IZUMO2Q6UXV1 221 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 SNX32Q86XE0 403 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 KYQ8NBH2 561 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ZDHHC6Q9H6R6 413 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ACTR8Q9H981 624 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 SEMA4BQ9NPR2 832 aaPredicted RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 PADI3Q9ULW8 664 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 CYP1A1P04798 512 aaPredicted RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 CCDC166P0CW27 439 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF23P17027 643 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 GRK4P32298 578 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ASPAP45381 313 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 RAP1GDS1P52306 607 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 NOMO1Q15155 1222 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 FCRL2Q96LA5 508 aaPredicted RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.29
VSTM4-202ENST00000332853 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 STARD13Q9Y3M8 1113 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ALOX15BO15296 676 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 PAGE1O75459 146 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 FSTL1Q12841 308 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 ANKRD22Q5VYY1 191 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 KCTD4Q8WVF5 259 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 DPF3Q92784 378 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 SPATA16Q9BXB7 569 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 CACNG4Q9UBN1 327 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 MYH6P13533 1939 aa13.21□□□□□ -0.29
VSTM4-202ENST00000332853 TBL1XO60907 577 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 FKBP1BP68106 108 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 CYP51A1Q16850 503 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 DET1Q7L5Y6 550 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 CENPLQ8N0S6 344 aaPredicted RBP13.21□□□□□ -0.3
VSTM4-202ENST00000332853 FNDC5Q8NAU1 212 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 CLEC4CQ8WTT0 213 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 DACH2Q96NX9 599 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 TEX12Q9BXU0 123 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 OSGEPL1Q9H4B0 414 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 ACSS2Q9NR19 701 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 RPTORQ8N122 1335 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 ASGR1P07306 291 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 EPB42P16452 691 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 MSH3P20585 1137 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 HOXD13P35453 343 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 CCL14Q16627 93 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 PFKFB4Q16877 469 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.3
VSTM4-202ENST00000332853 HECTD3Q5T447 861 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 SEMA3CQ99985 751 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 SOX13Q9UN79 622 aa13.21□□□□□ -0.3
VSTM4-202ENST00000332853 LYPLA1O75608 230 aaPredicted RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PROCP04070 461 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 NAB1Q13506 487 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ASTE1Q2TB18 679 aaPredicted RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 CNGB3Q9NQW8 809 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PCDHGC3Q9UN70 934 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 A0A087X1B8 175 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 FZD9O00144 591 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ADCY6O43306 1168 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 SMNDC1O75940 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ITGA2BP08514 1039 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 UBAP2LQ14157 1087 aaKnown RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PSMD5Q16401 504 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ACSS3Q9H6R3 686 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 NUP98P52948 1817 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PCDH8O95206 1070 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 C22orf31O95567 290 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 NAGLUP54802 743 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms