RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 ARFGAP3Q9NP61 516 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 C2orf42Q9NWW7 574 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 PLK2Q9NYY3 685 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYN3-201ENST00000332840 BCCIPQ9P287 314 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYN3-201ENST00000332840 DMGDHQ9UI17 866 aaKnown RBP10.02□□□□□ -0.81
SYN3-201ENST00000332840 STAP1Q9ULZ2 295 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 USP18Q9UMW8 372 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 NAALADL1Q9UQQ1 740 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 EFR3BQ9Y2G0 817 aa10.02□□□□□ -0.81
SYN3-201ENST00000332840 FAM187AA6NFU0 413 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 SGK1O00141 431 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 HRO43593 1189 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 PRPSAP2O60256 369 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 DAB1O75553 588 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 RHOBTB1O94844 696 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 HEXIM1O94992 359 aaKnown RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 F9P00740 461 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 IGLV3-25P01717 112 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 CISD3P0C7P0 127 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 RARAP10276 462 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 HOXB2P14652 356 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 TCF4P15884 667 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 SDHBP21912 280 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 KDELR1P24390 212 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 HOXD9P28356 352 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 TNFRSF8P28908 595 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 NOS2P35228 1153 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 DPP6P42658 865 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 MATKP42679 507 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 FNTAP49354 379 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 VSNL1P62760 191 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 SLC7A5Q01650 507 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 LMNB2Q03252 620 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 DMWDQ09019 674 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 MESP2Q0VG99 397 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 TAF5Q15542 800 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 DCAF6Q58WW2 860 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 TTC39BQ5VTQ0 682 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 TRNP1Q6NT89 227 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 MFSD7Q6UXD7 560 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 CCNI2Q6ZMN8 369 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 SPOCD1Q6ZMY3 1216 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 STRADAQ7RTN6 431 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 AHI1Q8N157 1196 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.01□□□□□ -0.81
SYN3-201ENST00000332840 ATP6V0D2Q8N8Y2 350 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 PRELID2Q8N945 189 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 C12orf50Q8NA57 414 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 ZC3H10Q96K80 434 aaKnown RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 FCRL2Q96LA5 508 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 TBCBQ99426 244 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 GABRG3Q99928 467 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 LRRC19Q9H756 370 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 ZWILCHQ9H900 591 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 DDIT4Q9NX09 232 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 PCSK1NQ9UHG2 260 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 FEZ2Q9UHY8 353 aaPredicted RBP10.01□□□□□ -0.81
SYN3-201ENST00000332840 PCDHGA5Q9Y5G8 931 aa10.01□□□□□ -0.81
SYN3-201ENST00000332840 hCG_1818297A0A087WSY0 165 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TCRBV21S2A2A0A5A6 115 aa10□□□□□ -0.81
SYN3-201ENST00000332840 LRRD1A4D1F6 860 aa10□□□□□ -0.81
SYN3-201ENST00000332840 PRRT4C9JH25 899 aa10□□□□□ -0.81
SYN3-201ENST00000332840 ATP8B1O43520 1251 aa10□□□□□ -0.81
SYN3-201ENST00000332840 ADAM23O75077 832 aa10□□□□□ -0.81
SYN3-201ENST00000332840 ZNF217O75362 1048 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TJP3O95049 919 aa10□□□□□ -0.81
SYN3-201ENST00000332840 MOCS2O96007 188 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 ATP5BP06576 529 aaKnown RBP10□□□□□ -0.81
SYN3-201ENST00000332840 IL1R2P27930 398 aa10□□□□□ -0.81
SYN3-201ENST00000332840 COILP38432 576 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 PXNP49023 591 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 OXCT1P55809 520 aa10□□□□□ -0.81
SYN3-201ENST00000332840 ATP11AP98196 1134 aa10□□□□□ -0.81
SYN3-201ENST00000332840 KLF1Q13351 362 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 CDH18Q13634 790 aa10□□□□□ -0.81
SYN3-201ENST00000332840 PDK2Q15119 407 aa10□□□□□ -0.81
SYN3-201ENST00000332840 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
SYN3-201ENST00000332840 ST3GAL2Q16842 350 aa10□□□□□ -0.81
SYN3-201ENST00000332840 CDO1Q16878 200 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TFDP3Q5H9I0 405 aa10□□□□□ -0.81
SYN3-201ENST00000332840 RABGAP1LQ5R372 815 aa10□□□□□ -0.81
SYN3-201ENST00000332840 EMC10Q5UCC4 262 aa10□□□□□ -0.81
SYN3-201ENST00000332840 PIK3R6Q5UE93 754 aa10□□□□□ -0.81
SYN3-201ENST00000332840 SYPL2Q5VXT5 272 aa10□□□□□ -0.81
SYN3-201ENST00000332840 RNF43Q68DV7 783 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TXNRD3NBQ6F5E7 133 aa10□□□□□ -0.81
SYN3-201ENST00000332840 SCYL2Q6P3W7 929 aa10□□□□□ -0.81
SYN3-201ENST00000332840 SND1Q7KZF4 910 aaKnown RBP eCLIP10□□□□□ -0.81
SYN3-201ENST00000332840 MAP7D3Q8IWC1 876 aa10□□□□□ -0.81
SYN3-201ENST00000332840 DEFB106AQ8N104 65 aa10□□□□□ -0.81
SYN3-201ENST00000332840 KCTD6Q8NC69 237 aa10□□□□□ -0.81
SYN3-201ENST00000332840 MDGA1Q8NFP4 955 aa10□□□□□ -0.81
SYN3-201ENST00000332840 FAM172AQ8WUF8 416 aa10□□□□□ -0.81
SYN3-201ENST00000332840 TEKT4Q8WW24 435 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms