RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NLRP9Q7RTR0 991 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CCNJLQ8IV13 435 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TMIEQ8NEW7 156 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ADAMTS19Q8TE59 1207 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ARHGEF2Q92974 986 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SPACA7Q96KW9 195 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CPEB1Q9BZB8 566 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 POLR1EQ9GZS1 481 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TRABDQ9H4I3 376 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ELOVL2Q9NXB9 296 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CWC15Q9P013 229 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 FBXO4Q9UKT5 387 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ERVW-1Q9UQF0 538 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MFHAS1Q9Y4C4 1052 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 WNT6Q9Y6F9 365 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CTAGE15A4D2H0 777 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TBC1D3BA6NDS4 549 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 WASH3PC4AMC7 463 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PFDN6O15212 129 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MAGEC1O60732 1142 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 EPOP01588 193 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CTAGE8P0CG41 777 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 GARSP41250 739 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 EIF3EP60228 445 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ELP6Q0PNE2 266 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MPP3Q13368 585 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TAF5Q15542 800 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 FNDC3BQ53EP0 1204 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SPDYCQ5MJ68 293 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 DNTTIP2Q5QJE6 756 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MARC1Q5VT66 337 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF776Q68DI1 518 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 NADSYN1Q6IA69 706 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 NEK5Q6P3R8 708 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 RHBDF2Q6PJF5 856 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TPRG1Q6ZUI0 275 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 USP30Q70CQ3 517 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CTAGE6Q86UF2 777 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CTAGE4Q8IX94 777 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SPEM1Q8N4L4 309 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 RTP4Q96DX8 246 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MAGEB5Q9BZ81 275 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 LRRC19Q9H756 370 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ATP13A3Q9H7F0 1226 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PCDH9Q9HC56 1237 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 LTB4R2Q9NPC1 389 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 HPS4Q9NQG7 708 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 IPO11Q9UI26 975 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 C2orf16Q68DN1 1984 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 C5orf60A6NFR6 353 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 EIF3HO15372 352 aaKnown RBP eCLIP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CST8O60676 142 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SRGAP2O75044 1071 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TULP3O75386 442 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ECEL1O95672 775 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 FTCDO95954 541 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SERPINA4P29622 427 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PPARGP37231 505 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SERPINH1P50454 418 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TAS2R40P59535 323 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PEX6Q13608 980 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PRKD1Q15139 912 aaPredicted RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF528Q3MIS6 628 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 DNAJC21Q5F1R6 531 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ALG1LQ6GMV1 187 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TRNP1Q6NT89 227 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 DARS2Q6PI48 645 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ZC3H14Q6PJT7 736 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ARHGEF18Q6ZSZ5 1173 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 TEX26Q8N6G2 289 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PTCD2Q8WV60 388 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ASB12Q8WXK4 309 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PEX13Q92968 403 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CLDN23Q96B33 292 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 SKA1Q96BD8 255 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PIWIL1Q96J94 861 aaKnown RBP5.28□□□□□ -1.56
LRIT3-201ENST00000327908 NAT9Q9BTE0 207 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ADGRE3Q9BY15 652 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CHRDQ9H2X0 955 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 RIMKLBQ9ULI2 386 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 PYCARDQ9ULZ3 195 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 MMP17Q9ULZ9 603 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 CAPN6Q9Y6Q1 641 aa5.28□□□□□ -1.56
LRIT3-201ENST00000327908 ARNTLO00327 626 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 APBB3O95704 486 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 TBX18O95935 607 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 KLKB1P03952 638 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 IL9P15248 144 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 TSHRP16473 764 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 GJA1P17302 382 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 XPAP23025 273 aaPredicted RBP5.27□□□□□ -1.57
LRIT3-201ENST00000327908 VIPR2P41587 438 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 MMP13P45452 471 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 ENPP2Q13822 863 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 ELAVL3Q14576 367 aaKnown RBP5.27□□□□□ -1.57
LRIT3-201ENST00000327908 NAPEPLDQ6IQ20 393 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 MFSD7Q6UXD7 560 aa5.27□□□□□ -1.57
LRIT3-201ENST00000327908 OR2T3Q8NH03 318 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms