RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM172BPA6NC97 362 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 CHURC1-FNTBB4DL54 471 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 FARP2O94887 1054 aaPredicted RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SPDYCQ5MJ68 293 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 ZCCHC8Q6NZY4 707 aaKnown RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 MCOLN2Q8IZK6 566 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 HASPINQ8TF76 798 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 TBX3O15119 743 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 OR6A2O95222 327 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SPANXN3Q5MJ09 141 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 PEG10Q86TG7 708 aaKnown RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SYT12Q8IV01 421 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SPAG4Q9NPE6 437 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 ZNF112Q9UJU3 913 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SYNPO2Q9UMS6 1093 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 TRIM38O00635 465 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 RPS6KA5O75582 802 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 RECQL5O94762 991 aaPredicted RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 CRTAMO95727 393 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 TIGD7Q6NT04 549 aaPredicted RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 RLN1P04808 185 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 PFKFB4Q16877 469 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 CRTC3Q6UUV7 619 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 ZCCHC9Q8N567 271 aaKnown RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 TNKS2Q9H2K2 1166 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 OSGEPL1Q9H4B0 414 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 GGA3Q9NZ52 723 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 E7ENX8 843 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 STX11O75558 287 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 SNRPB2P08579 225 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 FGRP09769 529 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 AZGP1P25311 298 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ASB14A6NK59 587 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 DDX3XO00571 662 aaKnown RBP eCLIP16.68■□□□□ 0.267e-9■□□□□ 10.5
SMAD3-201ENST00000327367 NUDT14O95848 222 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 NCK1P16333 377 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 MYL6P60660 151 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 PAN2Q504Q3 1202 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 OOSP2Q86WS3 158 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 RBM22Q9NW64 420 aaKnown RBP eCLIP16.68■□□□□ 0.264e-8■■■■□ 23.7
SMAD3-201ENST00000327367 ARHGAP28Q9P2N2 729 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 MLXQ9UH92 298 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 F5H5T6 163 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 GTF2E2P29084 291 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 BOP1Q14137 746 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 TYSND1Q2T9J0 566 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 R3HCC1LQ7Z5L2 792 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 EDEM1Q92611 657 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 USP7Q93009 1102 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.263e-7■□□□□ 8.4
SMAD3-201ENST00000327367 CBX4O00257 560 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 CRABP2P29373 138 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ALDH4A1P30038 563 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 FAM9CQ8IZT9 166 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 PCDHA3Q9Y5H8 950 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 TOP3BO95985 862 aaKnown RBP16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ZNF806P0C7X5 589 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 EPHA3P29320 983 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 DDR1Q08345 913 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ADAM32Q8TC27 787 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 PMM1Q92871 262 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 BLOC1S4Q9NUP1 217 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ERGIC3Q9Y282 383 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 ANKRD6Q9Y2G4 727 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 COQ6Q9Y2Z9 468 aa16.68■□□□□ 0.26
SMAD3-201ENST00000327367 TOR1BO14657 336 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 TRMUO75648 421 aaKnown RBP16.67■□□□□ 0.26
SMAD3-201ENST00000327367 ITGALP20701 1170 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 PRKAG1P54619 331 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 EFEMP1Q12805 493 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 OGFOD2Q6N063 350 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 PIWIL2Q8TC59 973 aaKnown RBP16.67■□□□□ 0.26
SMAD3-201ENST00000327367 IPCEF1Q8WWN9 437 aaPredicted RBP16.67■□□□□ 0.26
SMAD3-201ENST00000327367 NAT9Q9BTE0 207 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 MTF2Q9Y483 593 aaPredicted RBP16.67■□□□□ 0.26
SMAD3-201ENST00000327367 H0Y858 1186 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 KCNK1O00180 336 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 CCDC166P0CW27 439 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 LTKP29376 864 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 TTC23Q5W5X9 447 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 SLC9A4Q6AI14 798 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 PHACTR4Q8IZ21 702 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 KCNS3Q9BQ31 491 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 CISHQ9NSE2 258 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 SSR3Q9UNL2 185 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 SNAP91O60641 907 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 NR3C2P08235 984 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 SLC2A3P11169 496 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 GRIA4P48058 902 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 TAF6P49848 677 aa16.67■□□□□ 0.26
SMAD3-201ENST00000327367 TDRD10Q5VZ19 366 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms