RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CA12O43570 354 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 IGHA2P01877 340 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 MYL3P08590 195 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 GNAT1P11488 350 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 ERCC2P18074 760 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PITX1P78337 314 aaPredicted RBP20.26■□□□□ 0.83
SOX2-201ENST00000325404 C11orf91Q3C1V1 193 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 CES3Q6UWW8 571 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 KBTBD6Q86V97 674 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 SIX6OS1Q8N1H7 587 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PLD6Q8N2A8 252 aaKnown RBP20.26■□□□□ 0.83
SOX2-201ENST00000325404 PIP4K2CQ8TBX8 421 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 SLC26A7Q8TE54 656 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 ZNF358Q9NW07 568 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 TSC2P49815 1807 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PSMD3O43242 534 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 THRAP10827 490 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PTPN1P18031 435 aaKnown RBP20.26■□□□□ 0.83
SOX2-201ENST00000325404 TM4SF4P48230 202 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 LILRA4P59901 499 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 SATB1Q01826 763 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 TMEM62Q0P6H9 643 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 TBL3Q12788 808 aaKnown RBP20.26■□□□□ 0.83
SOX2-201ENST00000325404 VWA5B1Q5TIE3 1220 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 FOXB2Q5VYV0 432 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 RNF111Q6ZNA4 994 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 FRMD7Q6ZUT3 714 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PAQR9Q6ZVX9 377 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 OSTM1Q86WC4 334 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 KLHDC8BQ8IXV7 354 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PHTF2Q8N3S3 785 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 ZNF781Q8N8C0 355 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PHC3Q8NDX5 983 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 PYDC1Q8WXC3 89 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 BTBD9Q96Q07 612 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 ILKAPQ9H0C8 392 aaPredicted RBP20.26■□□□□ 0.83
SOX2-201ENST00000325404 VPS28Q9UK41 221 aa20.26■□□□□ 0.83
SOX2-201ENST00000325404 C2P06681 752 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 UQCRBP14927 111 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 LRPAP1P30533 357 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 POLD2P49005 469 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 EPHB1P54762 984 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 MPP3Q13368 585 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 SYPL2Q5VXT5 272 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 CWF19L1Q69YN2 538 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 SETD3Q86TU7 594 aaPredicted RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 PPP1R13LQ8WUF5 828 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 CDHR5Q9HBB8 845 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 WDR6Q9NNW5 1121 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 FBXW11Q9UKB1 542 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 TBC1D30Q9Y2I9 924 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 RAP2CQ9Y3L5 183 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 MYO18AQ92614 2054 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 SLCO1B7G3V0H7 640 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 KCNK1O00180 336 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 HAS3O00219 553 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 MAP3K13O43283 966 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 DCXO43602 365 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 UBTFL6P0CB48 400 aaPredicted RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 AKR1A1P14550 325 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 AKAP5P24588 427 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 BEX3Q00994 111 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 ZNF33AQ06730 810 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 GALNT2Q10471 571 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 CUL3Q13618 768 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 NAPRTQ6XQN6 538 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 CLEC20AQ6ZU45 233 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 CPSF7Q8N684 471 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 TDRD5Q8NAT2 981 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 NDRG1Q92597 394 aaKnown RBP20.25■□□□□ 0.83
SOX2-201ENST00000325404 KATNAL1Q9BW62 490 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 DRC3Q9H069 523 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 TMPRSS4Q9NRS4 437 aa20.25■□□□□ 0.83
SOX2-201ENST00000325404 MATN2O00339 956 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 GABRDO14764 452 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 ZBTB14O43829 449 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 CTGFP29279 349 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 ZYG11AQ6WRX3 759 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 SDCCAG8Q86SQ7 713 aaPredicted RBP20.24■□□□□ 0.83
SOX2-201ENST00000325404 KCNMB4Q86W47 210 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 TMEM126BQ8IUX1 230 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 TNS4Q8IZW8 715 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 DNAAF3Q8N9W5 541 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 ZIC5Q96T25 663 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 OSMRQ99650 979 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 ADAMTS6Q9UKP5 1117 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 CABYRO75952 493 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 COL6A2P12110 1019 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 CLCN2P51788 898 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 TPI1P60174 286 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 NME3Q13232 169 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 MED21Q13503 144 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 GRM2Q14416 872 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 FSCN1Q16658 493 aaKnown RBP20.24■□□□□ 0.83
SOX2-201ENST00000325404 ANO4Q32M45 955 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 SLC9B1Q4ZJI4 515 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 TUBGCP5Q96RT8 1024 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 AGAP2Q99490 1192 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 SERPINI1Q99574 410 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms