RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 MAPK10P53779 464 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 PITX1P78337 314 aaPredicted RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 PITRM1Q5JRX3 1037 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 MYO1HQ8N1T3 1032 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 KLHDC9Q8NEP7 349 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 GAB3Q8WWW8 586 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ARNTL2Q8WYA1 636 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 MCRS1Q96EZ8 462 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 CPB2Q96IY4 423 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 LRGUKQ96M69 825 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF518BQ9C0D4 1074 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 SMARCAD1Q9H4L7 1026 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ASNSD1Q9NWL6 643 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 MOCS1Q9NZB8 636 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 CPSF3Q9UKF6 684 aaKnown RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 TSPAN16Q9UKR8 245 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ENDOD1O94919 500 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 PFKMP08237 780 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 GOT1P17174 413 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 PIK3R1P27986 724 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 NDST1P52848 882 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 HDAC4P56524 1084 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 IL23RQ5VWK5 629 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 LHX8Q68G74 356 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 JADE1Q6IE81 842 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 TRIM67Q6ZTA4 783 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 ADGRG6Q86SQ4 1221 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 DCLK2Q8N568 766 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 SLC45A3Q96JT2 553 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 FAM167AQ96KS9 214 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 NRDE2Q9H7Z3 1164 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 SNX15Q9NRS6 342 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 CHCHD3Q9NX63 227 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 SFMBT1Q9UHJ3 866 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 RIMS3Q9UJD0 308 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 KCNK1O00180 336 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 BIRC5O15392 142 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 CPA3P15088 417 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 PSMB4P28070 264 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 MAGEA3P43357 314 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 STAT5BP51692 787 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 CLCN3P51790 818 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 LSM12Q3MHD2 195 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 LAYNQ6UX15 382 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 CMTM5Q96DZ9 223 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 SGF29Q96ES7 293 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 RPL10LQ96L21 214 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 TSEN34Q9BSV6 310 aaKnown RBP12.41□□□□□ -0.42
SEC24A-201ENST00000322887 UBP1Q9NZI7 540 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF711Q9Y462 761 aa12.41□□□□□ -0.42
SEC24A-201ENST00000322887 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 LACTBL1A8MY62 500 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PPEF2O14830 753 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PHGDHO43175 533 aaKnown RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 SPAG6O75602 509 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 HNRNPCP07910 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 TPH1P17752 444 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 TPP2P29144 1249 aaPredicted RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 ADARP55265 1226 aaKnown RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 IGBP1P78318 339 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 GJC2Q5T442 439 aaPredicted RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 LRRC8BQ6P9F7 803 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 ARCQ7LC44 396 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PCSK9Q8NBP7 692 aaKnown RBP12.4□□□□□ -0.42
SEC24A-201ENST00000322887 KHSRPQ92945 711 aaKnown RBP eCLIP12.4□□□□□ -0.425e-7■■■■□ 21
SEC24A-201ENST00000322887 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 OMDQ99983 421 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 ERAP1Q9NZ08 941 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PSMD13Q9UNM6 376 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 NME7Q9Y5B8 376 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 SMIM31A0A1B0GVY4 71 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 OGTO15294 1046 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 SUPT3HO75486 399 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 TMCC1O94876 653 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 CLIC3O95833 236 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 F2P00734 622 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 LGALS2P05162 132 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 PDGFRBP09619 1106 aa12.4□□□□□ -0.42
SEC24A-201ENST00000322887 FAM163BP0C2L3 166 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms