RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HGH1Q9BTY7 390 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 ISCA1Q9BUE6 129 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 SPATA5L1Q9BVQ7 753 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MSH4O15457 936 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 IL22Q9GZX6 179 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 CATSPERZQ9NTU4 200 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MARC1Q5VT66 337 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RNF148Q8N7C7 305 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 PSMD11O00231 422 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 CYB561D2O14569 222 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 SMIM11AP58511 58 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 BNIP2Q12982 314 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 PERM1Q5SV97 790 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 PIWIL2Q8TC59 973 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 PHF10Q8WUB8 498 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 CCNB1IP1Q9NPC3 277 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 JCHAINP01591 159 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RPLP2P05387 115 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 CCR1P32246 355 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 TCF7P36402 384 aaPredicted RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 SCARF1Q14162 830 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 DENND5AQ6IQ26 1287 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 BTN2A1Q7KYR7 527 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 OSGEPL1Q9H4B0 414 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 NEK6Q9HC98 313 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 OPTCQ9UBM4 332 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 TTLL13PA6NNM8 815 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 LOC110117498-PIK3R3F6TDL0 507 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 SNAP23O00161 211 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 CD44P16070 742 aaKnown RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 IFI35P80217 286 aaPredicted RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 PAGE2BQ5JRK9 111 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 CDKAL1Q5VV42 579 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 MIB1Q86YT6 1006 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 OFCC1Q8IZS5 231 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 RAPGEFL1Q9UHV5 662 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 CHADO15335 359 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 PANX3Q96QZ0 392 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 MED24O75448 989 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 DNAJB2P25686 324 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 PKNOX1P55347 436 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 H3BNX3 289 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 LSM1O15116 133 aaKnown RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 NUDT14O95848 222 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 RHOCP08134 193 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 OR56A5P0C7T3 313 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 COX7A2P14406 83 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 TYSND1Q2T9J0 566 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 ARCQ7LC44 396 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 IRGMA1A4Y4 181 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 SCNN1BP51168 640 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 COPZ1P61923 177 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 BIKQ13323 160 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 AGAP11Q8TF27 550 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 STX16-NPEPL1H3BU86 382 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 C2CD2LO14523 706 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 AP3D1O14617 1153 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 STX16O14662 325 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 SGTAO43765 313 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 ANPEPP15144 967 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 CYP11B2P19099 503 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
SMCHD1-201ENST00000320876 DPYSQ14117 519 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 MTF2Q9Y483 593 aaPredicted RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 CBX4O00257 560 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 BTN3A1O00481 513 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ZW10O43264 779 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 MT-CO1P00395 513 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 PTPN3P26045 913 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 DLG4P78352 724 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ORC1Q13415 861 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ARHGAP36Q6ZRI8 547 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 SEMA3DO95025 777 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 SERPINA6P08185 405 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 MGAT1P26572 445 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 EFEMP1Q12805 493 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ZFP69Q49AA0 526 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 B3GAT3O94766 335 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 CRATP43155 626 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 MYL6P60660 151 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 ACAP1Q15027 740 aa17.1■□□□□ 0.33
SMCHD1-201ENST00000320876 BHLHB9Q6PI77 547 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms